Hb_007403_010

Information

Type -
Description -
Location Contig7403: 9258-10980
Sequence    

Annotation

kegg
ID rcu:RCOM_0618990
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID KDP34540.1
description hypothetical protein JCGZ_11090 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067KQG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11090 PE=3 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007403_010 0.0 - - hypothetical protein JCGZ_11090 [Jatropha curcas]
2 Hb_010614_020 0.0625623718 - - BnaC05g27570D [Brassica napus]
3 Hb_004635_040 0.093343064 - - Polyprotein, putative [Solanum demissum]
4 Hb_002894_040 0.1036485909 - - conserved hypothetical protein [Ricinus communis]
5 Hb_036356_010 0.1038699966 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
6 Hb_002044_110 0.1415944833 - - PREDICTED: probable carboxylesterase 5 isoform X1 [Populus euphratica]
7 Hb_017661_020 0.144043274 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
8 Hb_004590_010 0.1447024876 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
9 Hb_007313_050 0.1504342759 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
10 Hb_010573_040 0.1517177773 - - PREDICTED: zinc-metallopeptidase, peroxisomal isoform X2 [Populus euphratica]
11 Hb_000509_040 0.1518949222 - - hypothetical protein VITISV_009716 [Vitis vinifera]
12 Hb_002049_030 0.1540678942 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
13 Hb_006020_010 0.1540772999 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
14 Hb_179118_010 0.1542204439 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
15 Hb_000991_110 0.1547096255 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
16 Hb_001213_080 0.1556980452 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
17 Hb_000127_070 0.1563528657 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
18 Hb_008959_050 0.1576001467 transcription factor TF Family: Orphans PREDICTED: late secretory pathway protein AVL9-like isoform X2 [Jatropha curcas]
19 Hb_001019_140 0.1602879413 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_004218_220 0.1624284706 - - o-methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007403_010 Hb_007403_010 Hb_010614_020 Hb_010614_020 Hb_007403_010--Hb_010614_020 Hb_004635_040 Hb_004635_040 Hb_007403_010--Hb_004635_040 Hb_002894_040 Hb_002894_040 Hb_007403_010--Hb_002894_040 Hb_036356_010 Hb_036356_010 Hb_007403_010--Hb_036356_010 Hb_002044_110 Hb_002044_110 Hb_007403_010--Hb_002044_110 Hb_017661_020 Hb_017661_020 Hb_007403_010--Hb_017661_020 Hb_010614_020--Hb_004635_040 Hb_010614_020--Hb_036356_010 Hb_010614_020--Hb_002044_110 Hb_010614_020--Hb_002894_040 Hb_002217_210 Hb_002217_210 Hb_010614_020--Hb_002217_210 Hb_004635_040--Hb_002217_210 Hb_004635_040--Hb_002044_110 Hb_005144_100 Hb_005144_100 Hb_004635_040--Hb_005144_100 Hb_004635_040--Hb_036356_010 Hb_000002_230 Hb_000002_230 Hb_002894_040--Hb_000002_230 Hb_008959_050 Hb_008959_050 Hb_002894_040--Hb_008959_050 Hb_007313_050 Hb_007313_050 Hb_002894_040--Hb_007313_050 Hb_004218_220 Hb_004218_220 Hb_002894_040--Hb_004218_220 Hb_036356_010--Hb_002044_110 Hb_010573_040 Hb_010573_040 Hb_036356_010--Hb_010573_040 Hb_036356_010--Hb_008959_050 Hb_002044_110--Hb_002217_210 Hb_002044_110--Hb_004218_220 Hb_002044_110--Hb_008959_050 Hb_027445_080 Hb_027445_080 Hb_017661_020--Hb_027445_080 Hb_002762_070 Hb_002762_070 Hb_017661_020--Hb_002762_070 Hb_000127_070 Hb_000127_070 Hb_017661_020--Hb_000127_070 Hb_012395_150 Hb_012395_150 Hb_017661_020--Hb_012395_150 Hb_005203_010 Hb_005203_010 Hb_017661_020--Hb_005203_010 Hb_004218_230 Hb_004218_230 Hb_017661_020--Hb_004218_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0628803 0.0156522 0.0519634 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0302523 0

CAGE analysis