Hb_001454_360

Information

Type -
Description -
Location Contig1454: 276898-278889
Sequence    

Annotation

kegg
ID rcu:RCOM_0681600
description hypothetical protein
nr
ID XP_012083966.1
description PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]
swissprot
ID Q84WN3
description Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2
trembl
ID A0A067JV29
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18896 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11800: 278489-278880
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001454_360 0.0 - - PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]
2 Hb_008948_060 0.1573116413 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001558_070 0.1655728481 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
4 Hb_000000_280 0.171065665 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007403_010 0.1778618505 - - hypothetical protein JCGZ_11090 [Jatropha curcas]
6 Hb_073171_010 0.1805147355 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
7 Hb_017661_020 0.1809244811 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
8 Hb_005380_030 0.1848461508 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
9 Hb_005695_020 0.1878231371 - - PREDICTED: low affinity sulfate transporter 3 [Jatropha curcas]
10 Hb_022206_030 0.1890899369 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
11 Hb_000127_070 0.189430759 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
12 Hb_001277_420 0.1904597983 - - PREDICTED: protein lin-12-like isoform X2 [Populus euphratica]
13 Hb_000431_180 0.191401178 - - PREDICTED: peroxidase 55 [Jatropha curcas]
14 Hb_000608_020 0.1944113134 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
15 Hb_005147_020 0.1988494571 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
16 Hb_000172_050 0.200499459 - - PREDICTED: uncharacterized protein LOC105650611 [Jatropha curcas]
17 Hb_000429_110 0.2008826993 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2-like [Populus euphratica]
18 Hb_000152_250 0.202308891 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
19 Hb_010614_020 0.2043336235 - - BnaC05g27570D [Brassica napus]
20 Hb_060237_010 0.2049914876 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001454_360 Hb_001454_360 Hb_008948_060 Hb_008948_060 Hb_001454_360--Hb_008948_060 Hb_001558_070 Hb_001558_070 Hb_001454_360--Hb_001558_070 Hb_000000_280 Hb_000000_280 Hb_001454_360--Hb_000000_280 Hb_007403_010 Hb_007403_010 Hb_001454_360--Hb_007403_010 Hb_073171_010 Hb_073171_010 Hb_001454_360--Hb_073171_010 Hb_017661_020 Hb_017661_020 Hb_001454_360--Hb_017661_020 Hb_000359_320 Hb_000359_320 Hb_008948_060--Hb_000359_320 Hb_008948_060--Hb_073171_010 Hb_002236_070 Hb_002236_070 Hb_008948_060--Hb_002236_070 Hb_006020_010 Hb_006020_010 Hb_008948_060--Hb_006020_010 Hb_001862_170 Hb_001862_170 Hb_008948_060--Hb_001862_170 Hb_001558_070--Hb_001862_170 Hb_000608_020 Hb_000608_020 Hb_001558_070--Hb_000608_020 Hb_000429_110 Hb_000429_110 Hb_001558_070--Hb_000429_110 Hb_001558_070--Hb_008948_060 Hb_001558_070--Hb_073171_010 Hb_005396_110 Hb_005396_110 Hb_000000_280--Hb_005396_110 Hb_000509_040 Hb_000509_040 Hb_000000_280--Hb_000509_040 Hb_003800_010 Hb_003800_010 Hb_000000_280--Hb_003800_010 Hb_132517_010 Hb_132517_010 Hb_000000_280--Hb_132517_010 Hb_000661_010 Hb_000661_010 Hb_000000_280--Hb_000661_010 Hb_010614_020 Hb_010614_020 Hb_007403_010--Hb_010614_020 Hb_004635_040 Hb_004635_040 Hb_007403_010--Hb_004635_040 Hb_002894_040 Hb_002894_040 Hb_007403_010--Hb_002894_040 Hb_036356_010 Hb_036356_010 Hb_007403_010--Hb_036356_010 Hb_002044_110 Hb_002044_110 Hb_007403_010--Hb_002044_110 Hb_007403_010--Hb_017661_020 Hb_001259_100 Hb_001259_100 Hb_073171_010--Hb_001259_100 Hb_052764_080 Hb_052764_080 Hb_073171_010--Hb_052764_080 Hb_000152_250 Hb_000152_250 Hb_073171_010--Hb_000152_250 Hb_015473_010 Hb_015473_010 Hb_073171_010--Hb_015473_010 Hb_005183_200 Hb_005183_200 Hb_073171_010--Hb_005183_200 Hb_001823_070 Hb_001823_070 Hb_073171_010--Hb_001823_070 Hb_027445_080 Hb_027445_080 Hb_017661_020--Hb_027445_080 Hb_002762_070 Hb_002762_070 Hb_017661_020--Hb_002762_070 Hb_000127_070 Hb_000127_070 Hb_017661_020--Hb_000127_070 Hb_012395_150 Hb_012395_150 Hb_017661_020--Hb_012395_150 Hb_005203_010 Hb_005203_010 Hb_017661_020--Hb_005203_010 Hb_004218_230 Hb_004218_230 Hb_017661_020--Hb_004218_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.74471 0.328202 1.91337 0 0.0313988
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.061564 0.145236 0.0881073 1.15348 0

CAGE analysis