Hb_006395_010

Information

Type -
Description -
Location Contig6395: 5725-6596
Sequence    

Annotation

kegg
ID rcu:RCOM_0725500
description hypothetical protein
nr
ID XP_002524902.1
description hypothetical protein RCOM_0725500 [Ricinus communis]
swissprot
ID P0C5E2
description Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=2 SV=2
trembl
ID B9SFY3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0725500 PE=4 SV=1
Gene Ontology
ID GO:0005488
description kinase superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006395_010 0.0 - - hypothetical protein RCOM_0725500 [Ricinus communis]
2 Hb_000365_290 0.0984642777 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
3 Hb_012395_150 0.0993166161 transcription factor TF Family: Orphans PREDICTED: two-component response regulator-like APRR7 [Jatropha curcas]
4 Hb_001998_260 0.1259715099 - - cytochrome P450, putative [Ricinus communis]
5 Hb_005144_100 0.1267376351 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
6 Hb_004635_040 0.1318905722 - - Polyprotein, putative [Solanum demissum]
7 Hb_002762_070 0.1347602546 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
8 Hb_000155_270 0.1401098705 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
9 Hb_000521_350 0.1418380139 - - unnamed protein product [Vitis vinifera]
10 Hb_183820_010 0.143668824 - - Disease resistance protein RFL1, putative [Ricinus communis]
11 Hb_060272_010 0.1437654221 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
12 Hb_136884_010 0.1469141019 - - Disease resistance protein RFL1, putative [Ricinus communis]
13 Hb_002217_210 0.1480008458 - - -
14 Hb_001157_130 0.1488285588 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
15 Hb_086122_030 0.150764056 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
16 Hb_006268_010 0.1520105903 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
17 Hb_008001_020 0.1522636055 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
18 Hb_012516_030 0.1553574388 - - PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
19 Hb_007850_040 0.1558441732 - - conserved hypothetical protein [Ricinus communis]
20 Hb_028008_030 0.1563131362 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]

Gene co-expression network

sample Hb_006395_010 Hb_006395_010 Hb_000365_290 Hb_000365_290 Hb_006395_010--Hb_000365_290 Hb_012395_150 Hb_012395_150 Hb_006395_010--Hb_012395_150 Hb_001998_260 Hb_001998_260 Hb_006395_010--Hb_001998_260 Hb_005144_100 Hb_005144_100 Hb_006395_010--Hb_005144_100 Hb_004635_040 Hb_004635_040 Hb_006395_010--Hb_004635_040 Hb_002762_070 Hb_002762_070 Hb_006395_010--Hb_002762_070 Hb_000365_290--Hb_002762_070 Hb_001283_010 Hb_001283_010 Hb_000365_290--Hb_001283_010 Hb_027445_080 Hb_027445_080 Hb_000365_290--Hb_027445_080 Hb_028207_030 Hb_028207_030 Hb_000365_290--Hb_028207_030 Hb_000077_460 Hb_000077_460 Hb_000365_290--Hb_000077_460 Hb_004590_010 Hb_004590_010 Hb_012395_150--Hb_004590_010 Hb_179118_010 Hb_179118_010 Hb_012395_150--Hb_179118_010 Hb_017661_020 Hb_017661_020 Hb_012395_150--Hb_017661_020 Hb_012879_010 Hb_012879_010 Hb_012395_150--Hb_012879_010 Hb_183820_010 Hb_183820_010 Hb_012395_150--Hb_183820_010 Hb_001799_090 Hb_001799_090 Hb_001998_260--Hb_001799_090 Hb_028008_030 Hb_028008_030 Hb_001998_260--Hb_028008_030 Hb_001998_260--Hb_005144_100 Hb_003266_060 Hb_003266_060 Hb_001998_260--Hb_003266_060 Hb_002289_110 Hb_002289_110 Hb_001998_260--Hb_002289_110 Hb_039496_010 Hb_039496_010 Hb_001998_260--Hb_039496_010 Hb_002217_210 Hb_002217_210 Hb_005144_100--Hb_002217_210 Hb_005144_100--Hb_003266_060 Hb_008959_050 Hb_008959_050 Hb_005144_100--Hb_008959_050 Hb_005144_100--Hb_004635_040 Hb_005144_100--Hb_001799_090 Hb_010614_020 Hb_010614_020 Hb_004635_040--Hb_010614_020 Hb_004635_040--Hb_002217_210 Hb_007403_010 Hb_007403_010 Hb_004635_040--Hb_007403_010 Hb_002044_110 Hb_002044_110 Hb_004635_040--Hb_002044_110 Hb_036356_010 Hb_036356_010 Hb_004635_040--Hb_036356_010 Hb_002762_070--Hb_027445_080 Hb_002762_070--Hb_017661_020 Hb_004837_170 Hb_004837_170 Hb_002762_070--Hb_004837_170 Hb_002762_070--Hb_028207_030 Hb_031862_090 Hb_031862_090 Hb_002762_070--Hb_031862_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.303281 0.0469068 0.433033 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.433911 0

CAGE analysis