Hb_004156_010

Information

Type -
Description -
Location Contig4156: 25070-28448
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID KDP46929.1
description hypothetical protein JCGZ_08917 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067LQQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08917 PE=4 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004156_010 0.0 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
2 Hb_027445_080 0.1277817004 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
3 Hb_031862_090 0.1343720268 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
4 Hb_005203_010 0.1349655731 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
5 Hb_002762_070 0.1385041119 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
6 Hb_017661_020 0.1451226796 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
7 Hb_002282_030 0.1509477991 - - -
8 Hb_000891_060 0.1540060331 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
9 Hb_000616_060 0.1560260493 - - -
10 Hb_000575_010 0.156998168 - - PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
11 Hb_000703_320 0.1576478203 - - receptor-kinase, putative [Ricinus communis]
12 Hb_005288_030 0.1588635801 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
13 Hb_028207_030 0.1598339482 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]
14 Hb_081448_010 0.1607026605 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
15 Hb_001021_140 0.1607115677 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
16 Hb_004837_170 0.1614438811 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
17 Hb_005380_030 0.1652308249 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
18 Hb_051100_010 0.1653751232 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
19 Hb_004341_010 0.1656025512 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
20 Hb_031954_010 0.1702662644 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_004156_010 Hb_004156_010 Hb_027445_080 Hb_027445_080 Hb_004156_010--Hb_027445_080 Hb_031862_090 Hb_031862_090 Hb_004156_010--Hb_031862_090 Hb_005203_010 Hb_005203_010 Hb_004156_010--Hb_005203_010 Hb_002762_070 Hb_002762_070 Hb_004156_010--Hb_002762_070 Hb_017661_020 Hb_017661_020 Hb_004156_010--Hb_017661_020 Hb_002282_030 Hb_002282_030 Hb_004156_010--Hb_002282_030 Hb_027445_080--Hb_002762_070 Hb_027445_080--Hb_017661_020 Hb_027445_080--Hb_005203_010 Hb_027445_080--Hb_031862_090 Hb_004837_170 Hb_004837_170 Hb_027445_080--Hb_004837_170 Hb_027445_080--Hb_002282_030 Hb_031862_090--Hb_005203_010 Hb_031862_090--Hb_002282_030 Hb_000891_060 Hb_000891_060 Hb_031862_090--Hb_000891_060 Hb_000616_060 Hb_000616_060 Hb_031862_090--Hb_000616_060 Hb_000575_010 Hb_000575_010 Hb_031862_090--Hb_000575_010 Hb_005203_010--Hb_002282_030 Hb_005203_010--Hb_000891_060 Hb_005203_010--Hb_000616_060 Hb_005203_010--Hb_000575_010 Hb_000365_290 Hb_000365_290 Hb_002762_070--Hb_000365_290 Hb_002762_070--Hb_017661_020 Hb_002762_070--Hb_004837_170 Hb_028207_030 Hb_028207_030 Hb_002762_070--Hb_028207_030 Hb_002762_070--Hb_031862_090 Hb_000127_070 Hb_000127_070 Hb_017661_020--Hb_000127_070 Hb_012395_150 Hb_012395_150 Hb_017661_020--Hb_012395_150 Hb_017661_020--Hb_005203_010 Hb_004218_230 Hb_004218_230 Hb_017661_020--Hb_004218_230 Hb_002282_030--Hb_000891_060 Hb_002282_030--Hb_000616_060 Hb_002282_030--Hb_000575_010 Hb_009543_040 Hb_009543_040 Hb_002282_030--Hb_009543_040 Hb_001157_130 Hb_001157_130 Hb_002282_030--Hb_001157_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.602574 0.00877703 0.378683 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0405309 0.390166 0

CAGE analysis