Hb_000663_030

Information

Type -
Description -
Location Contig663: 43186-45916
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000663_030 0.0 - - -
2 Hb_000347_090 0.2302147109 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]
3 Hb_011903_010 0.244807589 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_000624_020 0.251694075 transcription factor TF Family: NAC NAC transcription factor 004 [Jatropha curcas]
5 Hb_121304_020 0.2649168121 - - -
6 Hb_122259_010 0.273731252 - - -
7 Hb_144547_010 0.2742707927 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
8 Hb_004968_010 0.2832192232 - - PREDICTED: receptor-like protein 12 isoform X1 [Populus euphratica]
9 Hb_099990_030 0.2843301222 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
10 Hb_000787_010 0.2954696157 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
11 Hb_000438_150 0.2983322541 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7 [Jatropha curcas]
12 Hb_000377_140 0.3015455121 - - -
13 Hb_143933_010 0.3018719873 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
14 Hb_009189_040 0.3092559473 - - PREDICTED: uncharacterized protein LOC104446949 [Eucalyptus grandis]
15 Hb_161023_010 0.310045414 - - PREDICTED: uncharacterized protein LOC105639929 [Jatropha curcas]
16 Hb_000184_140 0.3108141461 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002235_180 0.3109301405 transcription factor TF Family: ERF PREDICTED: uncharacterized protein LOC105133481 [Populus euphratica]
18 Hb_001277_190 0.3137541413 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
19 Hb_123560_030 0.3139226907 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_009476_150 0.3154771091 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]

Gene co-expression network

sample Hb_000663_030 Hb_000663_030 Hb_000347_090 Hb_000347_090 Hb_000663_030--Hb_000347_090 Hb_011903_010 Hb_011903_010 Hb_000663_030--Hb_011903_010 Hb_000624_020 Hb_000624_020 Hb_000663_030--Hb_000624_020 Hb_121304_020 Hb_121304_020 Hb_000663_030--Hb_121304_020 Hb_122259_010 Hb_122259_010 Hb_000663_030--Hb_122259_010 Hb_144547_010 Hb_144547_010 Hb_000663_030--Hb_144547_010 Hb_000347_090--Hb_011903_010 Hb_188411_010 Hb_188411_010 Hb_000347_090--Hb_188411_010 Hb_068347_010 Hb_068347_010 Hb_000347_090--Hb_068347_010 Hb_161023_010 Hb_161023_010 Hb_000347_090--Hb_161023_010 Hb_000347_090--Hb_121304_020 Hb_011903_010--Hb_188411_010 Hb_011903_010--Hb_068347_010 Hb_006502_100 Hb_006502_100 Hb_011903_010--Hb_006502_100 Hb_011903_010--Hb_161023_010 Hb_000624_020--Hb_121304_020 Hb_002400_370 Hb_002400_370 Hb_000624_020--Hb_002400_370 Hb_001195_080 Hb_001195_080 Hb_000624_020--Hb_001195_080 Hb_004968_010 Hb_004968_010 Hb_000624_020--Hb_004968_010 Hb_010423_010 Hb_010423_010 Hb_000624_020--Hb_010423_010 Hb_001148_020 Hb_001148_020 Hb_121304_020--Hb_001148_020 Hb_121304_020--Hb_011903_010 Hb_121304_020--Hb_068347_010 Hb_000787_010 Hb_000787_010 Hb_122259_010--Hb_000787_010 Hb_047560_010 Hb_047560_010 Hb_122259_010--Hb_047560_010 Hb_004021_090 Hb_004021_090 Hb_122259_010--Hb_004021_090 Hb_122259_010--Hb_144547_010 Hb_066531_010 Hb_066531_010 Hb_122259_010--Hb_066531_010 Hb_000377_140 Hb_000377_140 Hb_144547_010--Hb_000377_140 Hb_144547_010--Hb_047560_010 Hb_009102_020 Hb_009102_020 Hb_144547_010--Hb_009102_020 Hb_000438_150 Hb_000438_150 Hb_144547_010--Hb_000438_150 Hb_143933_010 Hb_143933_010 Hb_144547_010--Hb_143933_010 Hb_000197_170 Hb_000197_170 Hb_144547_010--Hb_000197_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.1958 15.1717 5.51238 13.7755 1.8156 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis