Hb_011903_010

Information

Type -
Description -
Location Contig11903: 13489-14989
Sequence    

Annotation

kegg
ID rcu:RCOM_1494400
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.13)
nr
ID XP_002516046.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q8GX23
description Proline-rich receptor-like protein kinase PERK5 OS=Arabidopsis thaliana GN=PERK5 PE=2 SV=1
trembl
ID B9RQM7
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494400 PE=3 SV=1
Gene Ontology
ID GO:0004672
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011903_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000347_090 0.0238587396 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]
3 Hb_188411_010 0.2275648887 - - PREDICTED: U3 small nucleolar RNA-associated protein 25 [Jatropha curcas]
4 Hb_068347_010 0.2444077928 - - -
5 Hb_000663_030 0.244807589 - - -
6 Hb_006502_100 0.2594730298 - - hypothetical protein POPTR_0003s01580g [Populus trichocarpa]
7 Hb_161023_010 0.2633252129 - - PREDICTED: uncharacterized protein LOC105639929 [Jatropha curcas]
8 Hb_002843_090 0.2776820097 - - PREDICTED: CDPK-related kinase 4-like isoform X1 [Jatropha curcas]
9 Hb_121304_020 0.2813783276 - - -
10 Hb_099990_030 0.2900470469 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
11 Hb_014919_020 0.3043871445 - - -
12 Hb_000406_010 0.3075664447 - - PREDICTED: uncharacterized protein LOC105647846 [Jatropha curcas]
13 Hb_000964_100 0.3080693808 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
14 Hb_123560_030 0.320496139 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_019592_010 0.3227864078 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]
16 Hb_144547_010 0.3265064888 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
17 Hb_000413_150 0.3287940528 - - PREDICTED: uncharacterized protein LOC103709996 [Phoenix dactylifera]
18 Hb_005601_030 0.3303976347 - - organic anion transporter, putative [Ricinus communis]
19 Hb_061466_020 0.3318143742 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
20 Hb_010174_050 0.3353039163 - - PREDICTED: probable pectate lyase 5 [Populus euphratica]

Gene co-expression network

sample Hb_011903_010 Hb_011903_010 Hb_000347_090 Hb_000347_090 Hb_011903_010--Hb_000347_090 Hb_188411_010 Hb_188411_010 Hb_011903_010--Hb_188411_010 Hb_068347_010 Hb_068347_010 Hb_011903_010--Hb_068347_010 Hb_000663_030 Hb_000663_030 Hb_011903_010--Hb_000663_030 Hb_006502_100 Hb_006502_100 Hb_011903_010--Hb_006502_100 Hb_161023_010 Hb_161023_010 Hb_011903_010--Hb_161023_010 Hb_000347_090--Hb_000663_030 Hb_000347_090--Hb_188411_010 Hb_000347_090--Hb_068347_010 Hb_000347_090--Hb_161023_010 Hb_121304_020 Hb_121304_020 Hb_000347_090--Hb_121304_020 Hb_188411_010--Hb_161023_010 Hb_000406_010 Hb_000406_010 Hb_188411_010--Hb_000406_010 Hb_160233_020 Hb_160233_020 Hb_188411_010--Hb_160233_020 Hb_133605_010 Hb_133605_010 Hb_188411_010--Hb_133605_010 Hb_014919_020 Hb_014919_020 Hb_188411_010--Hb_014919_020 Hb_002843_090 Hb_002843_090 Hb_068347_010--Hb_002843_090 Hb_007805_020 Hb_007805_020 Hb_068347_010--Hb_007805_020 Hb_020549_010 Hb_020549_010 Hb_068347_010--Hb_020549_010 Hb_000982_150 Hb_000982_150 Hb_068347_010--Hb_000982_150 Hb_000624_020 Hb_000624_020 Hb_000663_030--Hb_000624_020 Hb_000663_030--Hb_121304_020 Hb_122259_010 Hb_122259_010 Hb_000663_030--Hb_122259_010 Hb_144547_010 Hb_144547_010 Hb_000663_030--Hb_144547_010 Hb_004007_060 Hb_004007_060 Hb_006502_100--Hb_004007_060 Hb_006502_100--Hb_000347_090 Hb_000260_540 Hb_000260_540 Hb_006502_100--Hb_000260_540 Hb_006502_100--Hb_188411_010 Hb_002627_070 Hb_002627_070 Hb_006502_100--Hb_002627_070 Hb_161023_010--Hb_160233_020 Hb_001214_170 Hb_001214_170 Hb_161023_010--Hb_001214_170 Hb_161023_010--Hb_014919_020 Hb_061466_020 Hb_061466_020 Hb_161023_010--Hb_061466_020 Hb_167508_010 Hb_167508_010 Hb_161023_010--Hb_167508_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.299987 0.0542416 0.101843 0.151661 0.0627054 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis