Hb_115326_010

Information

Type -
Description -
Location Contig115326: 591-1204
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115326_010 0.0 - - -
2 Hb_001427_140 0.2218079385 - - PREDICTED: probable phospholipase A2 homolog 1 [Jatropha curcas]
3 Hb_175450_010 0.2511721818 - - -
4 Hb_001519_070 0.258421144 - - hypothetical protein JCGZ_09841 [Jatropha curcas]
5 Hb_000282_140 0.2987232749 - - hypothetical protein JCGZ_07670 [Jatropha curcas]
6 Hb_002259_050 0.3088753532 - - unnamed protein product [Vitis vinifera]
7 Hb_004584_010 0.3179111697 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
8 Hb_010589_100 0.3280494443 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
9 Hb_005952_020 0.3317896642 - - -
10 Hb_005779_070 0.3327951215 - - -
11 Hb_008221_120 0.3344817933 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
12 Hb_002615_100 0.3388210561 - - -
13 Hb_000088_210 0.3405637644 - - hypothetical protein POPTR_0013s11310g [Populus trichocarpa]
14 Hb_005305_190 0.3448568227 transcription factor TF Family: NAC -
15 Hb_003992_120 0.3464081804 - - hypothetical protein MTR_6g089560 [Medicago truncatula]
16 Hb_081207_010 0.3478353487 - - hypothetical protein JCGZ_17195 [Jatropha curcas]
17 Hb_002228_090 0.3486125549 - - hypothetical protein POPTR_0006s23560g [Populus trichocarpa]
18 Hb_026766_010 0.349775656 - - -
19 Hb_024399_030 0.3510184445 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000603_240 0.3566549131 - - -

Gene co-expression network

sample Hb_115326_010 Hb_115326_010 Hb_001427_140 Hb_001427_140 Hb_115326_010--Hb_001427_140 Hb_175450_010 Hb_175450_010 Hb_115326_010--Hb_175450_010 Hb_001519_070 Hb_001519_070 Hb_115326_010--Hb_001519_070 Hb_000282_140 Hb_000282_140 Hb_115326_010--Hb_000282_140 Hb_002259_050 Hb_002259_050 Hb_115326_010--Hb_002259_050 Hb_004584_010 Hb_004584_010 Hb_115326_010--Hb_004584_010 Hb_001427_140--Hb_000282_140 Hb_006588_010 Hb_006588_010 Hb_001427_140--Hb_006588_010 Hb_081207_010 Hb_081207_010 Hb_001427_140--Hb_081207_010 Hb_002228_090 Hb_002228_090 Hb_001427_140--Hb_002228_090 Hb_001427_140--Hb_175450_010 Hb_175450_010--Hb_002259_050 Hb_175450_010--Hb_002228_090 Hb_175450_010--Hb_081207_010 Hb_002615_100 Hb_002615_100 Hb_175450_010--Hb_002615_100 Hb_002431_060 Hb_002431_060 Hb_175450_010--Hb_002431_060 Hb_000445_220 Hb_000445_220 Hb_175450_010--Hb_000445_220 Hb_000088_210 Hb_000088_210 Hb_001519_070--Hb_000088_210 Hb_000861_010 Hb_000861_010 Hb_001519_070--Hb_000861_010 Hb_001519_070--Hb_001427_140 Hb_173902_040 Hb_173902_040 Hb_001519_070--Hb_173902_040 Hb_167364_020 Hb_167364_020 Hb_001519_070--Hb_167364_020 Hb_001799_040 Hb_001799_040 Hb_000282_140--Hb_001799_040 Hb_000641_040 Hb_000641_040 Hb_000282_140--Hb_000641_040 Hb_002768_020 Hb_002768_020 Hb_000282_140--Hb_002768_020 Hb_109578_010 Hb_109578_010 Hb_000282_140--Hb_109578_010 Hb_000275_010 Hb_000275_010 Hb_000282_140--Hb_000275_010 Hb_002259_050--Hb_081207_010 Hb_002259_050--Hb_000445_220 Hb_006922_040 Hb_006922_040 Hb_002259_050--Hb_006922_040 Hb_002259_050--Hb_002431_060 Hb_002259_050--Hb_002228_090 Hb_026766_010 Hb_026766_010 Hb_004584_010--Hb_026766_010 Hb_003992_120 Hb_003992_120 Hb_004584_010--Hb_003992_120 Hb_000284_160 Hb_000284_160 Hb_004584_010--Hb_000284_160 Hb_003335_070 Hb_003335_070 Hb_004584_010--Hb_003335_070 Hb_000603_240 Hb_000603_240 Hb_004584_010--Hb_000603_240 Hb_027751_030 Hb_027751_030 Hb_004584_010--Hb_027751_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.6435 0 0.357574 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.769051 1.22548 0 0 0

CAGE analysis