Hb_027751_030

Information

Type -
Description -
Location Contig27751: 32726-33800
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027751_030 0.0 - - -
2 Hb_027751_040 0.1650707348 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
3 Hb_002843_190 0.1735290058 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 7 isoform X1 [Jatropha curcas]
4 Hb_002094_020 0.1793529519 - - PREDICTED: alpha-copaene synthase-like [Jatropha curcas]
5 Hb_000284_160 0.1812820207 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
6 Hb_026766_010 0.1945522476 - - -
7 Hb_001230_010 0.2214952176 - - -
8 Hb_001993_020 0.2222613562 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
9 Hb_002007_290 0.2228280719 - - -
10 Hb_007849_030 0.2346565866 - - l-allo-threonine aldolase, putative [Ricinus communis]
11 Hb_000614_330 0.2391037443 - - hypothetical protein POPTR_0008s18070g [Populus trichocarpa]
12 Hb_175445_010 0.2437165502 - - Pectin methylesterase 31 isoform 2, partial [Theobroma cacao]
13 Hb_003756_010 0.2441010139 - - PREDICTED: uncharacterized protein LOC105642108 [Jatropha curcas]
14 Hb_000603_240 0.2456577602 - - -
15 Hb_003745_010 0.247682485 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
16 Hb_000928_230 0.2488984984 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001980_020 0.2505993466 - - -
18 Hb_031862_050 0.251356459 - - Cell division cycle protein, putative [Ricinus communis]
19 Hb_003992_120 0.2540888344 - - hypothetical protein MTR_6g089560 [Medicago truncatula]
20 Hb_000959_360 0.2598068265 - - transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_027751_030 Hb_027751_030 Hb_027751_040 Hb_027751_040 Hb_027751_030--Hb_027751_040 Hb_002843_190 Hb_002843_190 Hb_027751_030--Hb_002843_190 Hb_002094_020 Hb_002094_020 Hb_027751_030--Hb_002094_020 Hb_000284_160 Hb_000284_160 Hb_027751_030--Hb_000284_160 Hb_026766_010 Hb_026766_010 Hb_027751_030--Hb_026766_010 Hb_001230_010 Hb_001230_010 Hb_027751_030--Hb_001230_010 Hb_003745_010 Hb_003745_010 Hb_027751_040--Hb_003745_010 Hb_027751_040--Hb_002843_190 Hb_012662_010 Hb_012662_010 Hb_027751_040--Hb_012662_010 Hb_001993_020 Hb_001993_020 Hb_027751_040--Hb_001993_020 Hb_003756_010 Hb_003756_010 Hb_027751_040--Hb_003756_010 Hb_028365_010 Hb_028365_010 Hb_002843_190--Hb_028365_010 Hb_010128_110 Hb_010128_110 Hb_002843_190--Hb_010128_110 Hb_003992_120 Hb_003992_120 Hb_002843_190--Hb_003992_120 Hb_001980_020 Hb_001980_020 Hb_002843_190--Hb_001980_020 Hb_017111_010 Hb_017111_010 Hb_002094_020--Hb_017111_010 Hb_000959_360 Hb_000959_360 Hb_002094_020--Hb_000959_360 Hb_002094_020--Hb_001230_010 Hb_000928_230 Hb_000928_230 Hb_002094_020--Hb_000928_230 Hb_126669_010 Hb_126669_010 Hb_002094_020--Hb_126669_010 Hb_000603_240 Hb_000603_240 Hb_000284_160--Hb_000603_240 Hb_000284_160--Hb_026766_010 Hb_000284_160--Hb_027751_040 Hb_000614_330 Hb_000614_330 Hb_000284_160--Hb_000614_330 Hb_000284_160--Hb_001993_020 Hb_026766_010--Hb_003992_120 Hb_004584_010 Hb_004584_010 Hb_026766_010--Hb_004584_010 Hb_026766_010--Hb_000614_330 Hb_026766_010--Hb_000603_240 Hb_002007_290 Hb_002007_290 Hb_001230_010--Hb_002007_290 Hb_166786_030 Hb_166786_030 Hb_001230_010--Hb_166786_030 Hb_001230_010--Hb_000928_230 Hb_031862_050 Hb_031862_050 Hb_001230_010--Hb_031862_050 Hb_001230_010--Hb_017111_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.7817 0 0 0 0.763153 1.57334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.99491 2.09323 0.318446 0.186207 0

CAGE analysis