Hb_027751_040

Information

Type -
Description -
Location Contig27751: 34678-41076
Sequence    

Annotation

kegg
ID sly:104644410
description uncharacterized LOC104644410
nr
ID XP_012075840.1
description PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027751_040 0.0 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
2 Hb_003745_010 0.1565457243 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
3 Hb_002843_190 0.1638034364 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 7 isoform X1 [Jatropha curcas]
4 Hb_027751_030 0.1650707348 - - -
5 Hb_012662_010 0.1740780443 - - hypothetical protein JCGZ_06358 [Jatropha curcas]
6 Hb_001993_020 0.1827123982 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
7 Hb_003756_010 0.1967704699 - - PREDICTED: uncharacterized protein LOC105642108 [Jatropha curcas]
8 Hb_002094_020 0.2098698714 - - PREDICTED: alpha-copaene synthase-like [Jatropha curcas]
9 Hb_028365_010 0.2123562774 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
10 Hb_003018_180 0.2127083941 - - PREDICTED: WEB family protein At3g51220-like [Jatropha curcas]
11 Hb_000928_230 0.2137377907 - - conserved hypothetical protein [Ricinus communis]
12 Hb_175445_010 0.2181738985 - - Pectin methylesterase 31 isoform 2, partial [Theobroma cacao]
13 Hb_000130_390 0.2193008698 - - PREDICTED: glutamate receptor 2.8-like [Pyrus x bretschneideri]
14 Hb_000959_360 0.2242590322 - - transporter, putative [Ricinus communis]
15 Hb_001980_020 0.2247025017 - - -
16 Hb_012347_010 0.2247698905 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
17 Hb_000720_180 0.2297211802 - - -
18 Hb_000002_390 0.2310931009 - - DNA binding protein, putative [Ricinus communis]
19 Hb_010872_060 0.2325966257 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
20 Hb_124315_040 0.233657923 - - hypothetical protein 19 [Hevea brasiliensis]

Gene co-expression network

sample Hb_027751_040 Hb_027751_040 Hb_003745_010 Hb_003745_010 Hb_027751_040--Hb_003745_010 Hb_002843_190 Hb_002843_190 Hb_027751_040--Hb_002843_190 Hb_027751_030 Hb_027751_030 Hb_027751_040--Hb_027751_030 Hb_012662_010 Hb_012662_010 Hb_027751_040--Hb_012662_010 Hb_001993_020 Hb_001993_020 Hb_027751_040--Hb_001993_020 Hb_003756_010 Hb_003756_010 Hb_027751_040--Hb_003756_010 Hb_001631_070 Hb_001631_070 Hb_003745_010--Hb_001631_070 Hb_019516_040 Hb_019516_040 Hb_003745_010--Hb_019516_040 Hb_000130_390 Hb_000130_390 Hb_003745_010--Hb_000130_390 Hb_012347_010 Hb_012347_010 Hb_003745_010--Hb_012347_010 Hb_003018_180 Hb_003018_180 Hb_003745_010--Hb_003018_180 Hb_028365_010 Hb_028365_010 Hb_002843_190--Hb_028365_010 Hb_002843_190--Hb_027751_030 Hb_010128_110 Hb_010128_110 Hb_002843_190--Hb_010128_110 Hb_003992_120 Hb_003992_120 Hb_002843_190--Hb_003992_120 Hb_001980_020 Hb_001980_020 Hb_002843_190--Hb_001980_020 Hb_002094_020 Hb_002094_020 Hb_027751_030--Hb_002094_020 Hb_000284_160 Hb_000284_160 Hb_027751_030--Hb_000284_160 Hb_026766_010 Hb_026766_010 Hb_027751_030--Hb_026766_010 Hb_001230_010 Hb_001230_010 Hb_027751_030--Hb_001230_010 Hb_010098_080 Hb_010098_080 Hb_012662_010--Hb_010098_080 Hb_012662_010--Hb_003018_180 Hb_012662_010--Hb_001993_020 Hb_001780_060 Hb_001780_060 Hb_012662_010--Hb_001780_060 Hb_113951_010 Hb_113951_010 Hb_012662_010--Hb_113951_010 Hb_000500_310 Hb_000500_310 Hb_012662_010--Hb_000500_310 Hb_000002_390 Hb_000002_390 Hb_001993_020--Hb_000002_390 Hb_001993_020--Hb_000500_310 Hb_000523_020 Hb_000523_020 Hb_001993_020--Hb_000523_020 Hb_002477_230 Hb_002477_230 Hb_001993_020--Hb_002477_230 Hb_010872_060 Hb_010872_060 Hb_003756_010--Hb_010872_060 Hb_175445_010 Hb_175445_010 Hb_003756_010--Hb_175445_010 Hb_012799_060 Hb_012799_060 Hb_003756_010--Hb_012799_060 Hb_001140_160 Hb_001140_160 Hb_003756_010--Hb_001140_160 Hb_000078_030 Hb_000078_030 Hb_003756_010--Hb_000078_030 Hb_000699_020 Hb_000699_020 Hb_003756_010--Hb_000699_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.425804 0 0 0 0.0731019 0.065165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.254062 0.099922 0.0618449 0 0

CAGE analysis