Hb_000256_130

Information

Type -
Description -
Location Contig256: 194065-194451
Sequence    

Annotation

kegg
ID rcu:RCOM_0922330
description hypothetical protein
nr
ID ADR71298.1
description hypothetical protein 21 [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID I3NMR1
description Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26688: 193986-195018
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000256_130 0.0 - - hypothetical protein 21 [Hevea brasiliensis]
2 Hb_000023_250 0.1415318706 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
3 Hb_000364_040 0.143162637 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
4 Hb_000976_280 0.1441845258 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
5 Hb_012107_010 0.1547782749 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
6 Hb_000634_070 0.1557219848 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
7 Hb_005663_070 0.1582156857 - - dehydrin protein [Manihot esculenta]
8 Hb_003605_240 0.1591137642 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
9 Hb_003078_050 0.1604225055 - - PREDICTED: serine/threonine-protein kinase OXI1 [Jatropha curcas]
10 Hb_006788_140 0.1615266746 - - PREDICTED: uncharacterized protein LOC105649915 [Jatropha curcas]
11 Hb_002205_010 0.1657254687 - - hypothetical protein JCGZ_03337 [Jatropha curcas]
12 Hb_002110_240 0.1664296024 - - clathrin assembly protein, putative [Ricinus communis]
13 Hb_001123_200 0.1665400267 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004108_240 0.1716643675 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
15 Hb_006909_060 0.1755824818 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum]
16 Hb_003411_030 0.1773005092 - - hypothetical protein POPTR_0010s13590g [Populus trichocarpa]
17 Hb_002572_050 0.1788593297 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
18 Hb_001235_170 0.1816534348 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
19 Hb_002701_220 0.1820403711 - - PREDICTED: solute carrier family 25 member 44 [Jatropha curcas]
20 Hb_171900_020 0.1836135544 - - PREDICTED: uncharacterized protein LOC105643207 [Jatropha curcas]

Gene co-expression network

sample Hb_000256_130 Hb_000256_130 Hb_000023_250 Hb_000023_250 Hb_000256_130--Hb_000023_250 Hb_000364_040 Hb_000364_040 Hb_000256_130--Hb_000364_040 Hb_000976_280 Hb_000976_280 Hb_000256_130--Hb_000976_280 Hb_012107_010 Hb_012107_010 Hb_000256_130--Hb_012107_010 Hb_000634_070 Hb_000634_070 Hb_000256_130--Hb_000634_070 Hb_005663_070 Hb_005663_070 Hb_000256_130--Hb_005663_070 Hb_000023_250--Hb_000976_280 Hb_000023_250--Hb_000364_040 Hb_116349_040 Hb_116349_040 Hb_000023_250--Hb_116349_040 Hb_000023_250--Hb_005663_070 Hb_006788_140 Hb_006788_140 Hb_000023_250--Hb_006788_140 Hb_003605_240 Hb_003605_240 Hb_000364_040--Hb_003605_240 Hb_000364_040--Hb_000976_280 Hb_000077_390 Hb_000077_390 Hb_000364_040--Hb_000077_390 Hb_015934_030 Hb_015934_030 Hb_000364_040--Hb_015934_030 Hb_011631_010 Hb_011631_010 Hb_000364_040--Hb_011631_010 Hb_000019_040 Hb_000019_040 Hb_000976_280--Hb_000019_040 Hb_001484_020 Hb_001484_020 Hb_000976_280--Hb_001484_020 Hb_000976_280--Hb_006788_140 Hb_000976_280--Hb_003605_240 Hb_013241_010 Hb_013241_010 Hb_000976_280--Hb_013241_010 Hb_000976_280--Hb_000077_390 Hb_002053_130 Hb_002053_130 Hb_012107_010--Hb_002053_130 Hb_001944_020 Hb_001944_020 Hb_012107_010--Hb_001944_020 Hb_000417_420 Hb_000417_420 Hb_012107_010--Hb_000417_420 Hb_002639_100 Hb_002639_100 Hb_012107_010--Hb_002639_100 Hb_001500_030 Hb_001500_030 Hb_012107_010--Hb_001500_030 Hb_003747_210 Hb_003747_210 Hb_012107_010--Hb_003747_210 Hb_003078_050 Hb_003078_050 Hb_000634_070--Hb_003078_050 Hb_003097_100 Hb_003097_100 Hb_000634_070--Hb_003097_100 Hb_000069_230 Hb_000069_230 Hb_000634_070--Hb_000069_230 Hb_000953_050 Hb_000953_050 Hb_000634_070--Hb_000953_050 Hb_001205_030 Hb_001205_030 Hb_000634_070--Hb_001205_030 Hb_028207_040 Hb_028207_040 Hb_000634_070--Hb_028207_040 Hb_171900_020 Hb_171900_020 Hb_005663_070--Hb_171900_020 Hb_006909_060 Hb_006909_060 Hb_005663_070--Hb_006909_060 Hb_004724_210 Hb_004724_210 Hb_005663_070--Hb_004724_210 Hb_005663_070--Hb_001944_020 Hb_001235_170 Hb_001235_170 Hb_005663_070--Hb_001235_170 Hb_005663_070--Hb_012107_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.0213 219.975 52.193 55.6824 15.9016 2.80407
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
51.2155 63.7686 45.468 30.8244 20.882

CAGE analysis