Hb_000976_280

Information

Type -
Description -
Location Contig976: 221539-222777
Sequence    

Annotation

kegg
ID rcu:RCOM_1576550
description hypothetical protein
nr
ID XP_012087430.1
description PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22667 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000976_280 0.0 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
2 Hb_000019_040 0.0983087021 - - PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Jatropha curcas]
3 Hb_001484_020 0.1217411179 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
4 Hb_006788_140 0.1218940746 - - PREDICTED: uncharacterized protein LOC105649915 [Jatropha curcas]
5 Hb_003605_240 0.1271289244 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
6 Hb_013241_010 0.132280398 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
7 Hb_000077_390 0.1328286056 transcription factor TF Family: ERF hypothetical protein POPTR_0019s13330g [Populus trichocarpa]
8 Hb_001766_020 0.1415665635 - - PREDICTED: probable galacturonosyltransferase 14 [Populus euphratica]
9 Hb_000256_130 0.1441845258 - - hypothetical protein 21 [Hevea brasiliensis]
10 Hb_000432_090 0.1446989163 - - calcium-dependent protein kinase [Hevea brasiliensis]
11 Hb_000364_040 0.1485060427 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
12 Hb_003728_040 0.1508212397 - - PREDICTED: uncharacterized protein LOC101492305 [Cicer arietinum]
13 Hb_000512_010 0.1536901988 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
14 Hb_001123_200 0.155915722 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003925_040 0.156834098 transcription factor TF Family: C2H2 PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Jatropha curcas]
16 Hb_000634_070 0.1594768483 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
17 Hb_189208_020 0.1596687947 - - LRX2, putative [Ricinus communis]
18 Hb_003055_140 0.1604078729 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
19 Hb_011631_010 0.1604890605 - - PREDICTED: uncharacterized protein LOC105641795 [Jatropha curcas]
20 Hb_002042_170 0.1610901019 - - RING/U-box superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_000976_280 Hb_000976_280 Hb_000019_040 Hb_000019_040 Hb_000976_280--Hb_000019_040 Hb_001484_020 Hb_001484_020 Hb_000976_280--Hb_001484_020 Hb_006788_140 Hb_006788_140 Hb_000976_280--Hb_006788_140 Hb_003605_240 Hb_003605_240 Hb_000976_280--Hb_003605_240 Hb_013241_010 Hb_013241_010 Hb_000976_280--Hb_013241_010 Hb_000077_390 Hb_000077_390 Hb_000976_280--Hb_000077_390 Hb_000019_040--Hb_006788_140 Hb_000512_010 Hb_000512_010 Hb_000019_040--Hb_000512_010 Hb_001766_020 Hb_001766_020 Hb_000019_040--Hb_001766_020 Hb_052764_030 Hb_052764_030 Hb_000019_040--Hb_052764_030 Hb_001104_170 Hb_001104_170 Hb_000019_040--Hb_001104_170 Hb_001484_020--Hb_000077_390 Hb_003077_050 Hb_003077_050 Hb_001484_020--Hb_003077_050 Hb_011631_010 Hb_011631_010 Hb_001484_020--Hb_011631_010 Hb_001484_020--Hb_000019_040 Hb_001484_020--Hb_013241_010 Hb_000987_060 Hb_000987_060 Hb_006788_140--Hb_000987_060 Hb_189208_020 Hb_189208_020 Hb_006788_140--Hb_189208_020 Hb_003175_030 Hb_003175_030 Hb_006788_140--Hb_003175_030 Hb_002097_200 Hb_002097_200 Hb_006788_140--Hb_002097_200 Hb_002701_220 Hb_002701_220 Hb_003605_240--Hb_002701_220 Hb_001123_200 Hb_001123_200 Hb_003605_240--Hb_001123_200 Hb_000364_040 Hb_000364_040 Hb_003605_240--Hb_000364_040 Hb_006909_060 Hb_006909_060 Hb_003605_240--Hb_006909_060 Hb_005496_180 Hb_005496_180 Hb_003605_240--Hb_005496_180 Hb_000432_090 Hb_000432_090 Hb_013241_010--Hb_000432_090 Hb_084490_010 Hb_084490_010 Hb_013241_010--Hb_084490_010 Hb_000815_240 Hb_000815_240 Hb_013241_010--Hb_000815_240 Hb_003925_040 Hb_003925_040 Hb_013241_010--Hb_003925_040 Hb_127311_010 Hb_127311_010 Hb_013241_010--Hb_127311_010 Hb_012239_020 Hb_012239_020 Hb_013241_010--Hb_012239_020 Hb_000077_390--Hb_003077_050 Hb_000077_390--Hb_127311_010 Hb_000077_390--Hb_013241_010 Hb_000042_330 Hb_000042_330 Hb_000077_390--Hb_000042_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.90837 22.3269 9.78128 6.04063 1.70668 2.01244
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.4115 7.49556 8.8147 4.40295 5.09496

CAGE analysis