Hb_000432_090

Information

Type -
Description -
Location Contig432: 110801-115855
Sequence    

Annotation

kegg
ID rcu:RCOM_0750920
description calcium-dependent protein kinase, putative (EC:2.7.11.17)
nr
ID AEI70328.1
description calcium-dependent protein kinase [Hevea brasiliensis]
swissprot
ID Q6NLQ6
description Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1
trembl
ID F8V179
description Calcium-dependent protein kinase OS=Hevea brasiliensis GN=CDPK1 PE=2 SV=1
Gene Ontology
ID GO:0004672
description calcium-dependent protein kinase 32-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42300: 110931-115722
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000432_090 0.0 - - calcium-dependent protein kinase [Hevea brasiliensis]
2 Hb_013241_010 0.1043746104 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
3 Hb_010872_070 0.144678136 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000976_280 0.1446989163 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
5 Hb_000987_060 0.1456888634 - - PREDICTED: BRCA1-A complex subunit Abraxas [Jatropha curcas]
6 Hb_002217_020 0.1487216417 - - PREDICTED: uncharacterized protein LOC105643601 isoform X1 [Jatropha curcas]
7 Hb_001856_200 0.1507561638 - - Esterase PIR7B, putative [Ricinus communis]
8 Hb_000538_030 0.1527523203 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_000152_330 0.158657101 - - PREDICTED: AT-hook motif nuclear-localized protein 6-like [Jatropha curcas]
10 Hb_001484_020 0.1607284698 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
11 Hb_003657_010 0.164204359 - - conserved hypothetical protein [Ricinus communis]
12 Hb_165026_010 0.1644854934 transcription factor TF Family: NAC hypothetical protein JCGZ_14166 [Jatropha curcas]
13 Hb_004324_300 0.165999415 - - hypothetical protein PRUPE_ppa012628mg [Prunus persica]
14 Hb_029799_010 0.166951567 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
15 Hb_007810_010 0.1713688135 - - PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]
16 Hb_000805_110 0.1715246476 - - PREDICTED: uncharacterized protein C24B11.05 [Jatropha curcas]
17 Hb_000363_210 0.1720127115 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
18 Hb_012762_030 0.1724139828 - - PREDICTED: uncharacterized protein LOC105634062 [Jatropha curcas]
19 Hb_000019_040 0.1726013021 - - PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Jatropha curcas]
20 Hb_000211_030 0.174131788 - - sugar transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000432_090 Hb_000432_090 Hb_013241_010 Hb_013241_010 Hb_000432_090--Hb_013241_010 Hb_010872_070 Hb_010872_070 Hb_000432_090--Hb_010872_070 Hb_000976_280 Hb_000976_280 Hb_000432_090--Hb_000976_280 Hb_000987_060 Hb_000987_060 Hb_000432_090--Hb_000987_060 Hb_002217_020 Hb_002217_020 Hb_000432_090--Hb_002217_020 Hb_001856_200 Hb_001856_200 Hb_000432_090--Hb_001856_200 Hb_084490_010 Hb_084490_010 Hb_013241_010--Hb_084490_010 Hb_000815_240 Hb_000815_240 Hb_013241_010--Hb_000815_240 Hb_003925_040 Hb_003925_040 Hb_013241_010--Hb_003925_040 Hb_127311_010 Hb_127311_010 Hb_013241_010--Hb_127311_010 Hb_012239_020 Hb_012239_020 Hb_013241_010--Hb_012239_020 Hb_026048_110 Hb_026048_110 Hb_010872_070--Hb_026048_110 Hb_002042_170 Hb_002042_170 Hb_010872_070--Hb_002042_170 Hb_002333_070 Hb_002333_070 Hb_010872_070--Hb_002333_070 Hb_000656_390 Hb_000656_390 Hb_010872_070--Hb_000656_390 Hb_010872_070--Hb_013241_010 Hb_007810_010 Hb_007810_010 Hb_010872_070--Hb_007810_010 Hb_000019_040 Hb_000019_040 Hb_000976_280--Hb_000019_040 Hb_001484_020 Hb_001484_020 Hb_000976_280--Hb_001484_020 Hb_006788_140 Hb_006788_140 Hb_000976_280--Hb_006788_140 Hb_003605_240 Hb_003605_240 Hb_000976_280--Hb_003605_240 Hb_000976_280--Hb_013241_010 Hb_000077_390 Hb_000077_390 Hb_000976_280--Hb_000077_390 Hb_000987_060--Hb_001856_200 Hb_000732_250 Hb_000732_250 Hb_000987_060--Hb_000732_250 Hb_000987_060--Hb_006788_140 Hb_007943_050 Hb_007943_050 Hb_000987_060--Hb_007943_050 Hb_006909_060 Hb_006909_060 Hb_000987_060--Hb_006909_060 Hb_002097_200 Hb_002097_200 Hb_000987_060--Hb_002097_200 Hb_022250_060 Hb_022250_060 Hb_002217_020--Hb_022250_060 Hb_007317_010 Hb_007317_010 Hb_002217_020--Hb_007317_010 Hb_003657_010 Hb_003657_010 Hb_002217_020--Hb_003657_010 Hb_136509_010 Hb_136509_010 Hb_002217_020--Hb_136509_010 Hb_002217_020--Hb_001856_200 Hb_000164_020 Hb_000164_020 Hb_002217_020--Hb_000164_020 Hb_001825_060 Hb_001825_060 Hb_001856_200--Hb_001825_060 Hb_000210_010 Hb_000210_010 Hb_001856_200--Hb_000210_010 Hb_141990_040 Hb_141990_040 Hb_001856_200--Hb_141990_040 Hb_000009_450 Hb_000009_450 Hb_001856_200--Hb_000009_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.6247 84.8451 50.9114 39.9182 11.2 17.8766
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
43.587 27.123 82.9169 17.2638 18.4456

CAGE analysis