Hb_001856_200

Information

Type -
Description -
Location Contig1856: 247638-253226
Sequence    

Annotation

kegg
ID rcu:RCOM_0049010
description Esterase PIR7B, putative (EC:3.1.1.78)
nr
ID XP_002533543.1
description Esterase PIR7B, putative [Ricinus communis]
swissprot
ID Q9FW03
description Putative methylesterase 11, chloroplastic OS=Arabidopsis thaliana GN=MES11 PE=2 SV=1
trembl
ID B9T5M4
description Esterase PIR7B, putative OS=Ricinus communis GN=RCOM_0049010 PE=4 SV=1
Gene Ontology
ID GO:0050529
description methylesterase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18171: 247623-253132
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001856_200 0.0 - - Esterase PIR7B, putative [Ricinus communis]
2 Hb_002217_020 0.0930377879 - - PREDICTED: uncharacterized protein LOC105643601 isoform X1 [Jatropha curcas]
3 Hb_001825_060 0.0948786995 - - PREDICTED: F-box/kelch-repeat protein OR23 [Jatropha curcas]
4 Hb_000987_060 0.1016307886 - - PREDICTED: BRCA1-A complex subunit Abraxas [Jatropha curcas]
5 Hb_000210_010 0.1111336491 - - PREDICTED: probable CCR4-associated factor 1 homolog 11 [Jatropha curcas]
6 Hb_141990_040 0.1200807229 - - Protein SCAR2, putative [Ricinus communis]
7 Hb_000009_450 0.1216971841 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Jatropha curcas]
8 Hb_000164_020 0.1297464819 - - actin binding protein, putative [Ricinus communis]
9 Hb_000465_230 0.1305938387 - - PREDICTED: transcriptional regulator ATRX homolog [Jatropha curcas]
10 Hb_000392_310 0.1311492868 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000679_090 0.1323219596 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Jatropha curcas]
12 Hb_004324_300 0.1336948888 - - hypothetical protein PRUPE_ppa012628mg [Prunus persica]
13 Hb_000007_140 0.1344379601 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Jatropha curcas]
14 Hb_034688_020 0.1351715605 - - PREDICTED: uncharacterized protein LOC105642050 [Jatropha curcas]
15 Hb_001189_140 0.1357185321 - - -
16 Hb_001473_040 0.1364436907 - - serine/threonine protein kinase, putative [Ricinus communis]
17 Hb_008566_050 0.1371485558 - - phosphoglycerate mutase, putative [Ricinus communis]
18 Hb_001159_110 0.1373280981 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
19 Hb_136509_010 0.1373755533 - - calmodulin-binding heat-shock protein, putative [Ricinus communis]
20 Hb_007317_010 0.1389631321 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001856_200 Hb_001856_200 Hb_002217_020 Hb_002217_020 Hb_001856_200--Hb_002217_020 Hb_001825_060 Hb_001825_060 Hb_001856_200--Hb_001825_060 Hb_000987_060 Hb_000987_060 Hb_001856_200--Hb_000987_060 Hb_000210_010 Hb_000210_010 Hb_001856_200--Hb_000210_010 Hb_141990_040 Hb_141990_040 Hb_001856_200--Hb_141990_040 Hb_000009_450 Hb_000009_450 Hb_001856_200--Hb_000009_450 Hb_022250_060 Hb_022250_060 Hb_002217_020--Hb_022250_060 Hb_007317_010 Hb_007317_010 Hb_002217_020--Hb_007317_010 Hb_003657_010 Hb_003657_010 Hb_002217_020--Hb_003657_010 Hb_136509_010 Hb_136509_010 Hb_002217_020--Hb_136509_010 Hb_000164_020 Hb_000164_020 Hb_002217_020--Hb_000164_020 Hb_001825_060--Hb_002217_020 Hb_012573_040 Hb_012573_040 Hb_001825_060--Hb_012573_040 Hb_012107_060 Hb_012107_060 Hb_001825_060--Hb_012107_060 Hb_001825_060--Hb_141990_040 Hb_000465_230 Hb_000465_230 Hb_001825_060--Hb_000465_230 Hb_000732_250 Hb_000732_250 Hb_000987_060--Hb_000732_250 Hb_006788_140 Hb_006788_140 Hb_000987_060--Hb_006788_140 Hb_007943_050 Hb_007943_050 Hb_000987_060--Hb_007943_050 Hb_006909_060 Hb_006909_060 Hb_000987_060--Hb_006909_060 Hb_002097_200 Hb_002097_200 Hb_000987_060--Hb_002097_200 Hb_000210_010--Hb_007943_050 Hb_000649_130 Hb_000649_130 Hb_000210_010--Hb_000649_130 Hb_000210_010--Hb_006909_060 Hb_000342_060 Hb_000342_060 Hb_000210_010--Hb_000342_060 Hb_000210_010--Hb_000164_020 Hb_141990_040--Hb_000009_450 Hb_141990_040--Hb_012573_040 Hb_000304_030 Hb_000304_030 Hb_141990_040--Hb_000304_030 Hb_000549_040 Hb_000549_040 Hb_141990_040--Hb_000549_040 Hb_004375_150 Hb_004375_150 Hb_000009_450--Hb_004375_150 Hb_000117_090 Hb_000117_090 Hb_000009_450--Hb_000117_090 Hb_000033_020 Hb_000033_020 Hb_000009_450--Hb_000033_020 Hb_012760_070 Hb_012760_070 Hb_000009_450--Hb_012760_070 Hb_008566_050 Hb_008566_050 Hb_000009_450--Hb_008566_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.1189 50.2904 23.9943 21.7022 10.3317 9.5389
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.5116 45.8684 51.9074 19.711 10.8888

CAGE analysis