Hb_001235_170

Information

Type -
Description -
Location Contig1235: 219625-222452
Sequence    

Annotation

kegg
ID rcu:RCOM_1060660
description glucosyltransferase, putative
nr
ID XP_012069979.1
description PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
swissprot
ID F4JMI5
description Putative glucuronosyltransferase PGSIP7 OS=Arabidopsis thaliana GN=PGSIP7 PE=3 SV=1
trembl
ID A0A067L6Z3
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_03400 PE=3 SV=1
Gene Ontology
ID GO:0016757
description glucuronosyltransferase pgsip8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07174: 219794-221453
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001235_170 0.0 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
2 Hb_001638_030 0.1026710821 desease resistance Gene Name: RPW8 PREDICTED: probable disease resistance protein At4g33300 [Jatropha curcas]
3 Hb_171900_020 0.1242185764 - - PREDICTED: uncharacterized protein LOC105643207 [Jatropha curcas]
4 Hb_005146_080 0.1301914933 - - PREDICTED: uncharacterized protein LOC105636704 isoform X2 [Jatropha curcas]
5 Hb_002685_200 0.1310226845 - - PREDICTED: uncharacterized protein LOC105632583 [Jatropha curcas]
6 Hb_014068_050 0.1357462699 - - PREDICTED: probable serine/threonine-protein kinase RLCKVII [Jatropha curcas]
7 Hb_001376_010 0.1442140851 - - diacylglycerol kinase, alpha, putative [Ricinus communis]
8 Hb_000925_030 0.1491330589 - - ATP-dependent RNA helicase, putative [Ricinus communis]
9 Hb_004724_210 0.1494311045 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002701_210 0.1503810554 - - Protein COBRA precursor, putative [Ricinus communis]
11 Hb_000179_240 0.1506307549 - - PREDICTED: threonine synthase 1, chloroplastic [Jatropha curcas]
12 Hb_005663_070 0.151061495 - - dehydrin protein [Manihot esculenta]
13 Hb_003925_040 0.1538000276 transcription factor TF Family: C2H2 PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Jatropha curcas]
14 Hb_000186_200 0.1544111696 - - PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Populus euphratica]
15 Hb_055488_020 0.1557053061 - - PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]
16 Hb_004117_170 0.1561242523 - - PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
17 Hb_000512_010 0.1573113033 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
18 Hb_009545_090 0.1574524777 - - hypothetical protein JCGZ_02186 [Jatropha curcas]
19 Hb_000205_240 0.1586090976 - - ubiquitin-protein ligase, putative [Ricinus communis]
20 Hb_000170_240 0.1601549901 - - PREDICTED: auxilin-related protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001235_170 Hb_001235_170 Hb_001638_030 Hb_001638_030 Hb_001235_170--Hb_001638_030 Hb_171900_020 Hb_171900_020 Hb_001235_170--Hb_171900_020 Hb_005146_080 Hb_005146_080 Hb_001235_170--Hb_005146_080 Hb_002685_200 Hb_002685_200 Hb_001235_170--Hb_002685_200 Hb_014068_050 Hb_014068_050 Hb_001235_170--Hb_014068_050 Hb_001376_010 Hb_001376_010 Hb_001235_170--Hb_001376_010 Hb_000925_030 Hb_000925_030 Hb_001638_030--Hb_000925_030 Hb_001638_030--Hb_002685_200 Hb_006538_130 Hb_006538_130 Hb_001638_030--Hb_006538_130 Hb_001638_030--Hb_001376_010 Hb_003147_060 Hb_003147_060 Hb_001638_030--Hb_003147_060 Hb_171900_020--Hb_005146_080 Hb_004117_170 Hb_004117_170 Hb_171900_020--Hb_004117_170 Hb_002042_170 Hb_002042_170 Hb_171900_020--Hb_002042_170 Hb_003925_040 Hb_003925_040 Hb_171900_020--Hb_003925_040 Hb_002053_130 Hb_002053_130 Hb_171900_020--Hb_002053_130 Hb_004450_050 Hb_004450_050 Hb_005146_080--Hb_004450_050 Hb_006643_020 Hb_006643_020 Hb_005146_080--Hb_006643_020 Hb_005146_080--Hb_014068_050 Hb_000170_240 Hb_000170_240 Hb_005146_080--Hb_000170_240 Hb_000179_240 Hb_000179_240 Hb_002685_200--Hb_000179_240 Hb_012634_020 Hb_012634_020 Hb_002685_200--Hb_012634_020 Hb_003077_050 Hb_003077_050 Hb_002685_200--Hb_003077_050 Hb_002701_210 Hb_002701_210 Hb_002685_200--Hb_002701_210 Hb_000084_240 Hb_000084_240 Hb_002685_200--Hb_000084_240 Hb_006538_080 Hb_006538_080 Hb_014068_050--Hb_006538_080 Hb_000111_180 Hb_000111_180 Hb_014068_050--Hb_000111_180 Hb_002301_170 Hb_002301_170 Hb_014068_050--Hb_002301_170 Hb_000512_010 Hb_000512_010 Hb_014068_050--Hb_000512_010 Hb_052764_030 Hb_052764_030 Hb_014068_050--Hb_052764_030 Hb_000205_240 Hb_000205_240 Hb_014068_050--Hb_000205_240 Hb_000035_050 Hb_000035_050 Hb_001376_010--Hb_000035_050 Hb_000638_280 Hb_000638_280 Hb_001376_010--Hb_000638_280 Hb_001376_010--Hb_004117_170 Hb_004108_240 Hb_004108_240 Hb_001376_010--Hb_004108_240 Hb_002965_050 Hb_002965_050 Hb_001376_010--Hb_002965_050 Hb_000156_090 Hb_000156_090 Hb_001376_010--Hb_000156_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.21162 5.11696 2.71967 2.64091 1.01441 0.553789
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.84831 1.31994 1.22258 1.41835 0.23478

CAGE analysis