Hb_033594_090

Information

Type -
Description -
Location Contig33594: 70439-71520
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033594_090 0.0 - - -
2 Hb_011344_100 0.2556180659 - - -
3 Hb_003702_070 0.2591472474 - - unnamed protein product [Vitis vinifera]
4 Hb_069659_010 0.2634093043 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
5 Hb_000309_060 0.2671202488 - - hypothetical protein JCGZ_09609 [Jatropha curcas]
6 Hb_001855_020 0.2692783548 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
7 Hb_027337_060 0.2785230666 - - -
8 Hb_011994_020 0.2958544157 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT5-like [Populus euphratica]
9 Hb_000417_020 0.3015224709 - - PREDICTED: uncharacterized protein LOC105649674 [Jatropha curcas]
10 Hb_001448_020 0.3016503326 - - hypothetical protein JCGZ_17204 [Jatropha curcas]
11 Hb_170516_010 0.3066193019 - - hypothetical protein MTR_001s0023 [Medicago truncatula]
12 Hb_002687_020 0.3071694647 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000227_340 0.3078657938 - - chloride channel clc, putative [Ricinus communis]
14 Hb_155666_010 0.3094830977 - - hypothetical protein JCGZ_01214 [Jatropha curcas]
15 Hb_001754_130 0.3096604187 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
16 Hb_001907_130 0.3135418135 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
17 Hb_000462_190 0.3158321721 - - PREDICTED: thaumatin-like protein 1 [Jatropha curcas]
18 Hb_011930_180 0.3159021127 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003849_120 0.3172871428 - - PREDICTED: uncharacterized protein LOC100264440 [Vitis vinifera]
20 Hb_004032_490 0.3174304364 - - PREDICTED: uncharacterized protein LOC100853401 [Vitis vinifera]

Gene co-expression network

sample Hb_033594_090 Hb_033594_090 Hb_011344_100 Hb_011344_100 Hb_033594_090--Hb_011344_100 Hb_003702_070 Hb_003702_070 Hb_033594_090--Hb_003702_070 Hb_069659_010 Hb_069659_010 Hb_033594_090--Hb_069659_010 Hb_000309_060 Hb_000309_060 Hb_033594_090--Hb_000309_060 Hb_001855_020 Hb_001855_020 Hb_033594_090--Hb_001855_020 Hb_027337_060 Hb_027337_060 Hb_033594_090--Hb_027337_060 Hb_001907_130 Hb_001907_130 Hb_011344_100--Hb_001907_130 Hb_170516_010 Hb_170516_010 Hb_011344_100--Hb_170516_010 Hb_115116_010 Hb_115116_010 Hb_011344_100--Hb_115116_010 Hb_065452_010 Hb_065452_010 Hb_011344_100--Hb_065452_010 Hb_005464_010 Hb_005464_010 Hb_011344_100--Hb_005464_010 Hb_014990_010 Hb_014990_010 Hb_003702_070--Hb_014990_010 Hb_000692_100 Hb_000692_100 Hb_003702_070--Hb_000692_100 Hb_000462_190 Hb_000462_190 Hb_003702_070--Hb_000462_190 Hb_001322_100 Hb_001322_100 Hb_003702_070--Hb_001322_100 Hb_000417_020 Hb_000417_020 Hb_003702_070--Hb_000417_020 Hb_000482_120 Hb_000482_120 Hb_003702_070--Hb_000482_120 Hb_002687_020 Hb_002687_020 Hb_069659_010--Hb_002687_020 Hb_004409_030 Hb_004409_030 Hb_069659_010--Hb_004409_030 Hb_000442_130 Hb_000442_130 Hb_069659_010--Hb_000442_130 Hb_001832_210 Hb_001832_210 Hb_069659_010--Hb_001832_210 Hb_000000_110 Hb_000000_110 Hb_069659_010--Hb_000000_110 Hb_001004_120 Hb_001004_120 Hb_069659_010--Hb_001004_120 Hb_155666_010 Hb_155666_010 Hb_000309_060--Hb_155666_010 Hb_011994_020 Hb_011994_020 Hb_000309_060--Hb_011994_020 Hb_002391_240 Hb_002391_240 Hb_000309_060--Hb_002391_240 Hb_006992_010 Hb_006992_010 Hb_000309_060--Hb_006992_010 Hb_000309_060--Hb_001855_020 Hb_000003_580 Hb_000003_580 Hb_000309_060--Hb_000003_580 Hb_001855_020--Hb_000482_120 Hb_004648_020 Hb_004648_020 Hb_001855_020--Hb_004648_020 Hb_012410_010 Hb_012410_010 Hb_001855_020--Hb_012410_010 Hb_010337_040 Hb_010337_040 Hb_001855_020--Hb_010337_040 Hb_007101_070 Hb_007101_070 Hb_001855_020--Hb_007101_070 Hb_001855_020--Hb_003702_070 Hb_004032_490 Hb_004032_490 Hb_027337_060--Hb_004032_490 Hb_002344_080 Hb_002344_080 Hb_027337_060--Hb_002344_080 Hb_000816_160 Hb_000816_160 Hb_027337_060--Hb_000816_160 Hb_001689_030 Hb_001689_030 Hb_027337_060--Hb_001689_030 Hb_002893_190 Hb_002893_190 Hb_027337_060--Hb_002893_190 Hb_000181_230 Hb_000181_230 Hb_027337_060--Hb_000181_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.524155 1.01048 2.58755 1.73974 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.3529 0.894294

CAGE analysis