Hb_000309_060

Information

Type -
Description -
Location Contig309: 70802-71776
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP45360.1
description hypothetical protein JCGZ_09609 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LKX0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09609 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32618: 70899-71020 , PASA_asmbl_32619: 71234-71554 , PASA_asmbl_32620: 71556-71993
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000309_060 0.0 - - hypothetical protein JCGZ_09609 [Jatropha curcas]
2 Hb_155666_010 0.1675616837 - - hypothetical protein JCGZ_01214 [Jatropha curcas]
3 Hb_011994_020 0.1780601643 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT5-like [Populus euphratica]
4 Hb_002391_240 0.1815520558 - - conserved hypothetical protein [Ricinus communis]
5 Hb_006992_010 0.1883207964 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_001855_020 0.1917705249 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
7 Hb_000003_580 0.1922497371 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003702_070 0.1983268484 - - unnamed protein product [Vitis vinifera]
9 Hb_012410_010 0.1987022731 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
10 Hb_113766_010 0.2071563154 - - plasma membrane H+ ATPase, partial [Nicotiana plumbaginifolia]
11 Hb_000103_300 0.2074603981 - - PREDICTED: perakine reductase-like [Jatropha curcas]
12 Hb_006916_140 0.2089956598 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
13 Hb_000193_070 0.2104578039 - - hypothetical protein JCGZ_25373 [Jatropha curcas]
14 Hb_002894_080 0.2105946546 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000574_170 0.2118448042 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Jatropha curcas]
16 Hb_002750_040 0.211926694 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
17 Hb_001008_080 0.212164053 - - PREDICTED: acyl-protein thioesterase 2 [Jatropha curcas]
18 Hb_000963_120 0.2141406055 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
19 Hb_000152_570 0.2143813603 - - 21 kDa protein precursor, putative [Ricinus communis]
20 Hb_005329_030 0.2154087691 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000309_060 Hb_000309_060 Hb_155666_010 Hb_155666_010 Hb_000309_060--Hb_155666_010 Hb_011994_020 Hb_011994_020 Hb_000309_060--Hb_011994_020 Hb_002391_240 Hb_002391_240 Hb_000309_060--Hb_002391_240 Hb_006992_010 Hb_006992_010 Hb_000309_060--Hb_006992_010 Hb_001855_020 Hb_001855_020 Hb_000309_060--Hb_001855_020 Hb_000003_580 Hb_000003_580 Hb_000309_060--Hb_000003_580 Hb_004117_020 Hb_004117_020 Hb_155666_010--Hb_004117_020 Hb_001410_080 Hb_001410_080 Hb_155666_010--Hb_001410_080 Hb_012410_010 Hb_012410_010 Hb_155666_010--Hb_012410_010 Hb_141194_020 Hb_141194_020 Hb_155666_010--Hb_141194_020 Hb_155666_010--Hb_002391_240 Hb_002370_050 Hb_002370_050 Hb_155666_010--Hb_002370_050 Hb_001894_020 Hb_001894_020 Hb_011994_020--Hb_001894_020 Hb_011930_180 Hb_011930_180 Hb_011994_020--Hb_011930_180 Hb_000903_040 Hb_000903_040 Hb_011994_020--Hb_000903_040 Hb_000964_040 Hb_000964_040 Hb_011994_020--Hb_000964_040 Hb_001754_130 Hb_001754_130 Hb_011994_020--Hb_001754_130 Hb_000193_070 Hb_000193_070 Hb_002391_240--Hb_000193_070 Hb_000103_300 Hb_000103_300 Hb_002391_240--Hb_000103_300 Hb_000152_570 Hb_000152_570 Hb_002391_240--Hb_000152_570 Hb_002284_060 Hb_002284_060 Hb_002391_240--Hb_002284_060 Hb_113766_010 Hb_113766_010 Hb_002391_240--Hb_113766_010 Hb_007370_010 Hb_007370_010 Hb_002391_240--Hb_007370_010 Hb_000963_120 Hb_000963_120 Hb_006992_010--Hb_000963_120 Hb_004374_030 Hb_004374_030 Hb_006992_010--Hb_004374_030 Hb_006992_010--Hb_113766_010 Hb_006992_010--Hb_002391_240 Hb_026198_020 Hb_026198_020 Hb_006992_010--Hb_026198_020 Hb_000309_070 Hb_000309_070 Hb_006992_010--Hb_000309_070 Hb_000482_120 Hb_000482_120 Hb_001855_020--Hb_000482_120 Hb_004648_020 Hb_004648_020 Hb_001855_020--Hb_004648_020 Hb_001855_020--Hb_012410_010 Hb_010337_040 Hb_010337_040 Hb_001855_020--Hb_010337_040 Hb_007101_070 Hb_007101_070 Hb_001855_020--Hb_007101_070 Hb_003702_070 Hb_003702_070 Hb_001855_020--Hb_003702_070 Hb_003086_030 Hb_003086_030 Hb_000003_580--Hb_003086_030 Hb_003125_210 Hb_003125_210 Hb_000003_580--Hb_003125_210 Hb_000003_580--Hb_000103_300 Hb_000457_120 Hb_000457_120 Hb_000003_580--Hb_000457_120 Hb_001936_120 Hb_001936_120 Hb_000003_580--Hb_001936_120 Hb_000003_580--Hb_002284_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.088854 0.0860598 0.447573 0.0943979 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0817514 0.317872

CAGE analysis