Hb_000963_120

Information

Type -
Description -
Location Contig963: 74792-81470
Sequence    

Annotation

kegg
ID rcu:RCOM_0154490
description protein binding protein, putative
nr
ID XP_012064832.1
description PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6K7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05529 PE=4 SV=1
Gene Ontology
ID GO:0008270
description protein binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000963_120 0.0 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
2 Hb_002119_110 0.053785768 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Jatropha curcas]
3 Hb_004374_030 0.0738285512 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
4 Hb_016277_030 0.0917914346 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
5 Hb_006916_140 0.0953016841 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
6 Hb_000309_070 0.0961524885 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
7 Hb_012239_060 0.0976203179 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
8 Hb_006992_010 0.1031893141 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
9 Hb_000000_290 0.1055669143 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Jatropha curcas]
10 Hb_001097_140 0.1094776055 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002284_060 0.1100203589 - - sugar transporter, putative [Ricinus communis]
12 Hb_005329_030 0.1104063308 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
13 Hb_004466_090 0.1117639074 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000784_060 0.1132569787 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000023_180 0.1137243363 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
16 Hb_000392_490 0.1151970506 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
17 Hb_002095_020 0.1152960196 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
18 Hb_002391_240 0.1171024885 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004032_190 0.1178129231 - - PREDICTED: probable cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X1 [Jatropha curcas]
20 Hb_006920_020 0.1181877665 - - endo-1,4-beta-glucanase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000963_120 Hb_000963_120 Hb_002119_110 Hb_002119_110 Hb_000963_120--Hb_002119_110 Hb_004374_030 Hb_004374_030 Hb_000963_120--Hb_004374_030 Hb_016277_030 Hb_016277_030 Hb_000963_120--Hb_016277_030 Hb_006916_140 Hb_006916_140 Hb_000963_120--Hb_006916_140 Hb_000309_070 Hb_000309_070 Hb_000963_120--Hb_000309_070 Hb_012239_060 Hb_012239_060 Hb_000963_120--Hb_012239_060 Hb_002119_110--Hb_004374_030 Hb_002119_110--Hb_016277_030 Hb_000784_060 Hb_000784_060 Hb_002119_110--Hb_000784_060 Hb_004032_190 Hb_004032_190 Hb_002119_110--Hb_004032_190 Hb_002119_110--Hb_012239_060 Hb_004374_030--Hb_016277_030 Hb_004466_090 Hb_004466_090 Hb_004374_030--Hb_004466_090 Hb_004374_030--Hb_000784_060 Hb_002095_020 Hb_002095_020 Hb_004374_030--Hb_002095_020 Hb_016277_030--Hb_004466_090 Hb_005183_100 Hb_005183_100 Hb_016277_030--Hb_005183_100 Hb_001206_100 Hb_001206_100 Hb_016277_030--Hb_001206_100 Hb_016277_030--Hb_004032_190 Hb_016277_030--Hb_000784_060 Hb_005329_030 Hb_005329_030 Hb_006916_140--Hb_005329_030 Hb_009222_080 Hb_009222_080 Hb_006916_140--Hb_009222_080 Hb_000392_490 Hb_000392_490 Hb_006916_140--Hb_000392_490 Hb_000023_180 Hb_000023_180 Hb_006916_140--Hb_000023_180 Hb_094437_020 Hb_094437_020 Hb_006916_140--Hb_094437_020 Hb_000309_070--Hb_000392_490 Hb_000309_070--Hb_004374_030 Hb_000309_070--Hb_002119_110 Hb_006992_010 Hb_006992_010 Hb_000309_070--Hb_006992_010 Hb_002374_510 Hb_002374_510 Hb_000309_070--Hb_002374_510 Hb_012239_060--Hb_016277_030 Hb_003097_220 Hb_003097_220 Hb_012239_060--Hb_003097_220 Hb_012239_060--Hb_005183_100 Hb_005057_030 Hb_005057_030 Hb_012239_060--Hb_005057_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0359505 1.42743 1.46554 7.36976 0.0487364 0.0704493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0385144 0.0151529 0 1.48716 7.65141

CAGE analysis