Hb_001206_100

Information

Type -
Description -
Location Contig1206: 109806-110644
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021915mg
description hypothetical protein
nr
ID XP_007219414.1
description hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5XGK0
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021915mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001206_100 0.0 - - hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
2 Hb_005183_100 0.0611865217 - - hypothetical protein CICLE_v10002898mg [Citrus clementina]
3 Hb_009421_070 0.0660793024 - - PREDICTED: cell number regulator 1-like [Jatropha curcas]
4 Hb_002942_200 0.0717867038 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH137 isoform X1 [Jatropha curcas]
5 Hb_009522_020 0.0724651173 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
6 Hb_016277_030 0.0725319842 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
7 Hb_004032_190 0.0740405847 - - PREDICTED: probable cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X1 [Jatropha curcas]
8 Hb_001296_060 0.074457462 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
9 Hb_001098_040 0.0836291151 - - hypothetical protein JCGZ_00749 [Jatropha curcas]
10 Hb_001268_150 0.0879775129 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
11 Hb_000364_090 0.0932087575 - - PREDICTED: filament-like plant protein 7 isoform X2 [Jatropha curcas]
12 Hb_002986_030 0.098769525 - - hypothetical protein JCGZ_12380 [Jatropha curcas]
13 Hb_005723_090 0.1002338293 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004466_090 0.1019706744 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000784_060 0.1040973799 - - conserved hypothetical protein [Ricinus communis]
16 Hb_008221_200 0.1049789637 - - PREDICTED: protein trichome birefringence-like 41 [Jatropha curcas]
17 Hb_000329_440 0.1057879563 - - PREDICTED: F-box protein At5g51370-like [Jatropha curcas]
18 Hb_005842_010 0.1066725211 - - nitrate transporter, putative [Ricinus communis]
19 Hb_163950_050 0.1071338684 - - protein binding protein, putative [Ricinus communis]
20 Hb_001369_390 0.1072677878 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_001206_100 Hb_001206_100 Hb_005183_100 Hb_005183_100 Hb_001206_100--Hb_005183_100 Hb_009421_070 Hb_009421_070 Hb_001206_100--Hb_009421_070 Hb_002942_200 Hb_002942_200 Hb_001206_100--Hb_002942_200 Hb_009522_020 Hb_009522_020 Hb_001206_100--Hb_009522_020 Hb_016277_030 Hb_016277_030 Hb_001206_100--Hb_016277_030 Hb_004032_190 Hb_004032_190 Hb_001206_100--Hb_004032_190 Hb_005723_090 Hb_005723_090 Hb_005183_100--Hb_005723_090 Hb_005183_100--Hb_016277_030 Hb_005183_100--Hb_009522_020 Hb_005057_030 Hb_005057_030 Hb_005183_100--Hb_005057_030 Hb_000000_290 Hb_000000_290 Hb_005183_100--Hb_000000_290 Hb_000665_210 Hb_000665_210 Hb_009421_070--Hb_000665_210 Hb_001098_040 Hb_001098_040 Hb_009421_070--Hb_001098_040 Hb_000784_060 Hb_000784_060 Hb_009421_070--Hb_000784_060 Hb_005842_010 Hb_005842_010 Hb_009421_070--Hb_005842_010 Hb_009421_070--Hb_004032_190 Hb_002942_200--Hb_001098_040 Hb_008221_200 Hb_008221_200 Hb_002942_200--Hb_008221_200 Hb_002942_200--Hb_009421_070 Hb_007270_020 Hb_007270_020 Hb_002942_200--Hb_007270_020 Hb_009393_090 Hb_009393_090 Hb_002942_200--Hb_009393_090 Hb_010222_060 Hb_010222_060 Hb_009522_020--Hb_010222_060 Hb_013394_120 Hb_013394_120 Hb_009522_020--Hb_013394_120 Hb_173387_010 Hb_173387_010 Hb_009522_020--Hb_173387_010 Hb_001296_060 Hb_001296_060 Hb_009522_020--Hb_001296_060 Hb_004374_030 Hb_004374_030 Hb_016277_030--Hb_004374_030 Hb_004466_090 Hb_004466_090 Hb_016277_030--Hb_004466_090 Hb_016277_030--Hb_004032_190 Hb_016277_030--Hb_000784_060 Hb_000364_090 Hb_000364_090 Hb_004032_190--Hb_000364_090 Hb_004032_190--Hb_004466_090 Hb_004032_190--Hb_000784_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0481358 0.0877604 0.207049 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.021014 0.20888

CAGE analysis