Hb_001098_040

Information

Type -
Description -
Location Contig1098: 95300-99285
Sequence    

Annotation

kegg
ID tcc:TCM_031233
description S-locus lectin protein kinase family protein
nr
ID KDP38992.1
description hypothetical protein JCGZ_00749 [Jatropha curcas]
swissprot
ID O81832
description G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4
trembl
ID A0A067KS82
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_00749 PE=3 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase at4g27290

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001098_040 0.0 - - hypothetical protein JCGZ_00749 [Jatropha curcas]
2 Hb_002942_200 0.0547482945 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH137 isoform X1 [Jatropha curcas]
3 Hb_000329_440 0.0649102751 - - PREDICTED: F-box protein At5g51370-like [Jatropha curcas]
4 Hb_009421_070 0.0661383368 - - PREDICTED: cell number regulator 1-like [Jatropha curcas]
5 Hb_060253_010 0.0770403791 - - hypothetical protein JCGZ_14707 [Jatropha curcas]
6 Hb_000627_050 0.0803025717 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
7 Hb_000977_020 0.0805546054 - - beta-hexosaminidase, putative [Ricinus communis]
8 Hb_001206_100 0.0836291151 - - hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
9 Hb_007270_020 0.0848592097 - - hypothetical protein JCGZ_09593 [Jatropha curcas]
10 Hb_004835_020 0.0854447742 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
11 Hb_000076_060 0.0862950771 - - hypothetical protein RCOM_0586940 [Ricinus communis]
12 Hb_001296_060 0.0877481103 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
13 Hb_005569_010 0.0892429954 - - Heme-binding protein, putative [Ricinus communis]
14 Hb_000520_040 0.0909695701 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
15 Hb_000665_210 0.0922394309 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
16 Hb_009522_020 0.0929359206 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
17 Hb_000500_240 0.0932133062 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005694_160 0.0933905803 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000212_410 0.0938479754 - - PREDICTED: serine carboxypeptidase 1-like [Jatropha curcas]
20 Hb_001417_060 0.0941786221 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]

Gene co-expression network

sample Hb_001098_040 Hb_001098_040 Hb_002942_200 Hb_002942_200 Hb_001098_040--Hb_002942_200 Hb_000329_440 Hb_000329_440 Hb_001098_040--Hb_000329_440 Hb_009421_070 Hb_009421_070 Hb_001098_040--Hb_009421_070 Hb_060253_010 Hb_060253_010 Hb_001098_040--Hb_060253_010 Hb_000627_050 Hb_000627_050 Hb_001098_040--Hb_000627_050 Hb_000977_020 Hb_000977_020 Hb_001098_040--Hb_000977_020 Hb_008221_200 Hb_008221_200 Hb_002942_200--Hb_008221_200 Hb_001206_100 Hb_001206_100 Hb_002942_200--Hb_001206_100 Hb_002942_200--Hb_009421_070 Hb_007270_020 Hb_007270_020 Hb_002942_200--Hb_007270_020 Hb_009393_090 Hb_009393_090 Hb_002942_200--Hb_009393_090 Hb_000520_040 Hb_000520_040 Hb_000329_440--Hb_000520_040 Hb_000500_240 Hb_000500_240 Hb_000329_440--Hb_000500_240 Hb_004835_020 Hb_004835_020 Hb_000329_440--Hb_004835_020 Hb_102179_010 Hb_102179_010 Hb_000329_440--Hb_102179_010 Hb_005694_160 Hb_005694_160 Hb_000329_440--Hb_005694_160 Hb_000665_210 Hb_000665_210 Hb_009421_070--Hb_000665_210 Hb_009421_070--Hb_001206_100 Hb_000784_060 Hb_000784_060 Hb_009421_070--Hb_000784_060 Hb_005842_010 Hb_005842_010 Hb_009421_070--Hb_005842_010 Hb_004032_190 Hb_004032_190 Hb_009421_070--Hb_004032_190 Hb_003435_030 Hb_003435_030 Hb_060253_010--Hb_003435_030 Hb_060253_010--Hb_007270_020 Hb_060253_010--Hb_000520_040 Hb_000046_120 Hb_000046_120 Hb_060253_010--Hb_000046_120 Hb_000212_410 Hb_000212_410 Hb_060253_010--Hb_000212_410 Hb_009788_020 Hb_009788_020 Hb_060253_010--Hb_009788_020 Hb_000627_050--Hb_000212_410 Hb_000703_120 Hb_000703_120 Hb_000627_050--Hb_000703_120 Hb_000627_050--Hb_009788_020 Hb_000627_050--Hb_007270_020 Hb_069696_020 Hb_069696_020 Hb_000627_050--Hb_069696_020 Hb_000627_050--Hb_000977_020 Hb_002724_010 Hb_002724_010 Hb_000977_020--Hb_002724_010 Hb_000977_020--Hb_000212_410 Hb_000977_020--Hb_009421_070 Hb_000977_020--Hb_000703_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0720512 0.210098 0.286351 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0442999 0.37114

CAGE analysis