Hb_006916_140

Information

Type -
Description -
Location Contig6916: 155351-162289
Sequence    

Annotation

kegg
ID rcu:RCOM_0917970
description phospholipase C, putative
nr
ID XP_012088055.1
description PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
swissprot
ID Q93XX5
description PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1
trembl
ID A0A067JXN1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25585 PE=4 SV=1
Gene Ontology
ID GO:0008081
description pi-plc x domain-containing protein at5g67130-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54428: 155430-156253 , PASA_asmbl_54429: 156302-161674 , PASA_asmbl_54430: 156302-157607
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006916_140 0.0 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
2 Hb_000963_120 0.0953016841 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
3 Hb_005329_030 0.1011629921 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
4 Hb_009222_080 0.105846068 - - RING-H2 finger protein ATL2J, putative [Ricinus communis]
5 Hb_000392_490 0.1084715978 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
6 Hb_000023_180 0.1110736743 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
7 Hb_094437_020 0.1146862948 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
8 Hb_000245_100 0.1275971257 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
9 Hb_002119_110 0.1318442055 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Jatropha curcas]
10 Hb_000000_290 0.1322947597 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Jatropha curcas]
11 Hb_000392_540 0.1334387446 - - PREDICTED: hypersensitive-induced response protein 1 [Sesamum indicum]
12 Hb_000856_210 0.1338774085 - - nitrate transporter, putative [Ricinus communis]
13 Hb_000309_070 0.1339405662 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
14 Hb_001976_100 0.1348208401 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Jatropha curcas]
15 Hb_026198_020 0.1350003703 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
16 Hb_000207_240 0.1399596329 - - hypothetical protein RCOM_0686540 [Ricinus communis]
17 Hb_001221_470 0.1401975689 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
18 Hb_001950_100 0.1404349387 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
19 Hb_004374_030 0.1406694535 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
20 Hb_004204_220 0.1412437169 - - -

Gene co-expression network

sample Hb_006916_140 Hb_006916_140 Hb_000963_120 Hb_000963_120 Hb_006916_140--Hb_000963_120 Hb_005329_030 Hb_005329_030 Hb_006916_140--Hb_005329_030 Hb_009222_080 Hb_009222_080 Hb_006916_140--Hb_009222_080 Hb_000392_490 Hb_000392_490 Hb_006916_140--Hb_000392_490 Hb_000023_180 Hb_000023_180 Hb_006916_140--Hb_000023_180 Hb_094437_020 Hb_094437_020 Hb_006916_140--Hb_094437_020 Hb_002119_110 Hb_002119_110 Hb_000963_120--Hb_002119_110 Hb_004374_030 Hb_004374_030 Hb_000963_120--Hb_004374_030 Hb_016277_030 Hb_016277_030 Hb_000963_120--Hb_016277_030 Hb_000309_070 Hb_000309_070 Hb_000963_120--Hb_000309_070 Hb_012239_060 Hb_012239_060 Hb_000963_120--Hb_012239_060 Hb_005329_030--Hb_000023_180 Hb_005329_030--Hb_004374_030 Hb_005329_030--Hb_000963_120 Hb_004204_220 Hb_004204_220 Hb_005329_030--Hb_004204_220 Hb_000000_290 Hb_000000_290 Hb_005329_030--Hb_000000_290 Hb_002685_220 Hb_002685_220 Hb_009222_080--Hb_002685_220 Hb_005725_160 Hb_005725_160 Hb_009222_080--Hb_005725_160 Hb_010968_030 Hb_010968_030 Hb_009222_080--Hb_010968_030 Hb_009222_080--Hb_005329_030 Hb_000245_100 Hb_000245_100 Hb_009222_080--Hb_000245_100 Hb_000392_490--Hb_000309_070 Hb_001629_050 Hb_001629_050 Hb_000392_490--Hb_001629_050 Hb_000392_490--Hb_005329_030 Hb_026198_020 Hb_026198_020 Hb_000392_490--Hb_026198_020 Hb_000392_490--Hb_000963_120 Hb_000023_180--Hb_000000_290 Hb_005391_050 Hb_005391_050 Hb_000023_180--Hb_005391_050 Hb_002835_070 Hb_002835_070 Hb_000023_180--Hb_002835_070 Hb_001976_100 Hb_001976_100 Hb_000023_180--Hb_001976_100 Hb_001950_100 Hb_001950_100 Hb_000023_180--Hb_001950_100 Hb_003858_060 Hb_003858_060 Hb_094437_020--Hb_003858_060 Hb_000207_240 Hb_000207_240 Hb_094437_020--Hb_000207_240 Hb_000856_210 Hb_000856_210 Hb_094437_020--Hb_000856_210 Hb_094437_020--Hb_000392_490 Hb_094437_020--Hb_004204_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0439088 1.48623 0.562617 4.96513 0.0900438 0.0496094
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0181978 0.0429586 0 1.22281 4.68449

CAGE analysis