Hb_026198_020

Information

Type -
Description -
Location Contig26198: 57470-58081
Sequence    

Annotation

kegg
ID pop:POPTR_0019s11250g
description POPTRDRAFT_665754; hypothetical protein
nr
ID XP_012072606.1
description PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L173
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06356 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27373: 57416-57895
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026198_020 0.0 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
2 Hb_002750_040 0.082575296 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
3 Hb_113766_010 0.0979717637 - - plasma membrane H+ ATPase, partial [Nicotiana plumbaginifolia]
4 Hb_002391_240 0.1067561429 - - conserved hypothetical protein [Ricinus communis]
5 Hb_090390_010 0.1078302371 - - hypothetical protein POPTR_0006s28850g [Populus trichocarpa]
6 Hb_000392_490 0.1146846711 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
7 Hb_006992_010 0.1150505506 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
8 Hb_009122_010 0.1194558489 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_001221_470 0.1240560742 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
10 Hb_002374_510 0.1242590606 - - Esterase precursor, putative [Ricinus communis]
11 Hb_000152_570 0.1251891552 - - 21 kDa protein precursor, putative [Ricinus communis]
12 Hb_000103_300 0.1278266974 - - PREDICTED: perakine reductase-like [Jatropha curcas]
13 Hb_000963_120 0.1281078691 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
14 Hb_005545_110 0.1291551781 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
15 Hb_000309_070 0.1305217845 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
16 Hb_000193_070 0.1307976776 - - hypothetical protein JCGZ_25373 [Jatropha curcas]
17 Hb_007370_010 0.1319991017 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
18 Hb_006916_140 0.1350003703 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
19 Hb_141194_020 0.1371381556 - - carbohydrate transporter, putative [Ricinus communis]
20 Hb_001410_080 0.1387329685 - - ring finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_026198_020 Hb_026198_020 Hb_002750_040 Hb_002750_040 Hb_026198_020--Hb_002750_040 Hb_113766_010 Hb_113766_010 Hb_026198_020--Hb_113766_010 Hb_002391_240 Hb_002391_240 Hb_026198_020--Hb_002391_240 Hb_090390_010 Hb_090390_010 Hb_026198_020--Hb_090390_010 Hb_000392_490 Hb_000392_490 Hb_026198_020--Hb_000392_490 Hb_006992_010 Hb_006992_010 Hb_026198_020--Hb_006992_010 Hb_002750_040--Hb_113766_010 Hb_001404_070 Hb_001404_070 Hb_002750_040--Hb_001404_070 Hb_009122_010 Hb_009122_010 Hb_002750_040--Hb_009122_010 Hb_002750_040--Hb_002391_240 Hb_001269_580 Hb_001269_580 Hb_002750_040--Hb_001269_580 Hb_000103_300 Hb_000103_300 Hb_113766_010--Hb_000103_300 Hb_113766_010--Hb_002391_240 Hb_000152_570 Hb_000152_570 Hb_113766_010--Hb_000152_570 Hb_002284_060 Hb_002284_060 Hb_113766_010--Hb_002284_060 Hb_000193_070 Hb_000193_070 Hb_002391_240--Hb_000193_070 Hb_002391_240--Hb_000103_300 Hb_002391_240--Hb_000152_570 Hb_002391_240--Hb_002284_060 Hb_007370_010 Hb_007370_010 Hb_002391_240--Hb_007370_010 Hb_094437_030 Hb_094437_030 Hb_090390_010--Hb_094437_030 Hb_002374_510 Hb_002374_510 Hb_090390_010--Hb_002374_510 Hb_090390_010--Hb_009122_010 Hb_001396_130 Hb_001396_130 Hb_090390_010--Hb_001396_130 Hb_003983_010 Hb_003983_010 Hb_090390_010--Hb_003983_010 Hb_000309_070 Hb_000309_070 Hb_000392_490--Hb_000309_070 Hb_006916_140 Hb_006916_140 Hb_000392_490--Hb_006916_140 Hb_001629_050 Hb_001629_050 Hb_000392_490--Hb_001629_050 Hb_005329_030 Hb_005329_030 Hb_000392_490--Hb_005329_030 Hb_000963_120 Hb_000963_120 Hb_000392_490--Hb_000963_120 Hb_006992_010--Hb_000963_120 Hb_004374_030 Hb_004374_030 Hb_006992_010--Hb_004374_030 Hb_006992_010--Hb_113766_010 Hb_006992_010--Hb_002391_240 Hb_006992_010--Hb_000309_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0422664 0.754293 0.78781 6.03347 0.0425278 0.136949
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.89412 4.18911

CAGE analysis