Hb_005329_030

Information

Type -
Description -
Location Contig5329: 38560-40421
Sequence    

Annotation

kegg
ID mus:103986332
description minor allergen Alt a 7-like
nr
ID XP_012091444.1
description PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
swissprot
ID Q9LSQ5
description NAD(P)H dehydrogenase (quinone) FQR1 OS=Arabidopsis thaliana GN=FQR1 PE=1 SV=1
trembl
ID A0A067JAK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21312 PE=3 SV=1
Gene Ontology
ID GO:0010181
description minor allergen alt a 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005329_030 0.0 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
2 Hb_000023_180 0.0849181435 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
3 Hb_006916_140 0.1011629921 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
4 Hb_004374_030 0.1062464887 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
5 Hb_000963_120 0.1104063308 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
6 Hb_004204_220 0.1109002176 - - -
7 Hb_000000_290 0.1111250111 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Jatropha curcas]
8 Hb_000392_490 0.1113576168 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
9 Hb_002095_020 0.112936024 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
10 Hb_000245_100 0.1168852098 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
11 Hb_005391_050 0.1205572339 - - PREDICTED: uncharacterized protein LOC105643654 [Jatropha curcas]
12 Hb_016277_030 0.1218085136 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
13 Hb_009222_080 0.1259021915 - - RING-H2 finger protein ATL2J, putative [Ricinus communis]
14 Hb_001950_100 0.1260173987 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
15 Hb_002391_240 0.1262929843 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002119_110 0.1264831317 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Jatropha curcas]
17 Hb_000622_030 0.1267996387 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
18 Hb_011161_090 0.1272628723 - - -
19 Hb_000309_070 0.1303668038 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
20 Hb_002284_060 0.1314544009 - - sugar transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_005329_030 Hb_005329_030 Hb_000023_180 Hb_000023_180 Hb_005329_030--Hb_000023_180 Hb_006916_140 Hb_006916_140 Hb_005329_030--Hb_006916_140 Hb_004374_030 Hb_004374_030 Hb_005329_030--Hb_004374_030 Hb_000963_120 Hb_000963_120 Hb_005329_030--Hb_000963_120 Hb_004204_220 Hb_004204_220 Hb_005329_030--Hb_004204_220 Hb_000000_290 Hb_000000_290 Hb_005329_030--Hb_000000_290 Hb_000023_180--Hb_000000_290 Hb_005391_050 Hb_005391_050 Hb_000023_180--Hb_005391_050 Hb_002835_070 Hb_002835_070 Hb_000023_180--Hb_002835_070 Hb_001976_100 Hb_001976_100 Hb_000023_180--Hb_001976_100 Hb_001950_100 Hb_001950_100 Hb_000023_180--Hb_001950_100 Hb_006916_140--Hb_000963_120 Hb_009222_080 Hb_009222_080 Hb_006916_140--Hb_009222_080 Hb_000392_490 Hb_000392_490 Hb_006916_140--Hb_000392_490 Hb_006916_140--Hb_000023_180 Hb_094437_020 Hb_094437_020 Hb_006916_140--Hb_094437_020 Hb_016277_030 Hb_016277_030 Hb_004374_030--Hb_016277_030 Hb_004466_090 Hb_004466_090 Hb_004374_030--Hb_004466_090 Hb_000784_060 Hb_000784_060 Hb_004374_030--Hb_000784_060 Hb_004374_030--Hb_000963_120 Hb_002119_110 Hb_002119_110 Hb_004374_030--Hb_002119_110 Hb_002095_020 Hb_002095_020 Hb_004374_030--Hb_002095_020 Hb_000963_120--Hb_002119_110 Hb_000963_120--Hb_016277_030 Hb_000309_070 Hb_000309_070 Hb_000963_120--Hb_000309_070 Hb_012239_060 Hb_012239_060 Hb_000963_120--Hb_012239_060 Hb_001629_050 Hb_001629_050 Hb_004204_220--Hb_001629_050 Hb_003858_060 Hb_003858_060 Hb_004204_220--Hb_003858_060 Hb_011161_090 Hb_011161_090 Hb_004204_220--Hb_011161_090 Hb_004204_220--Hb_002095_020 Hb_000834_100 Hb_000834_100 Hb_004204_220--Hb_000834_100 Hb_002902_070 Hb_002902_070 Hb_004204_220--Hb_002902_070 Hb_000622_030 Hb_000622_030 Hb_000000_290--Hb_000622_030 Hb_005183_100 Hb_005183_100 Hb_000000_290--Hb_005183_100 Hb_005723_090 Hb_005723_090 Hb_000000_290--Hb_005723_090 Hb_000000_290--Hb_002835_070 Hb_000000_290--Hb_016277_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.85713 1.53566 9.17867 0.0282989 0.0336213
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0924246 2.20449 7.69431

CAGE analysis