Hb_001269_580

Information

Type -
Description -
Location Contig1269: 602319-606543
Sequence    

Annotation

kegg
ID rcu:RCOM_1442250
description Anthranilate N-benzoyltransferase protein, putative (EC:2.3.1.144)
nr
ID XP_012067474.1
description PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
swissprot
ID Q9FI78
description Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1
trembl
ID A0A067L3Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26971 PE=4 SV=1
Gene Ontology
ID GO:0005829
description anthranilate n-benzoyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08236: 602368-606427
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001269_580 0.0 - - PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
2 Hb_002890_110 0.102090859 - - PREDICTED: protein NRT1/ PTR FAMILY 4.3 [Jatropha curcas]
3 Hb_009122_010 0.1044647714 - - o-methyltransferase, putative [Ricinus communis]
4 Hb_002750_040 0.1131452026 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
5 Hb_004117_020 0.1324544607 - - conserved hypothetical protein [Ricinus communis]
6 Hb_174541_030 0.1356777835 - - Cytochrome P450, family 98, subfamily A, polypeptide 3 [Theobroma cacao]
7 Hb_002203_020 0.1427155413 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001404_070 0.1433582174 - - sucrose synthase 4 [Hevea brasiliensis]
9 Hb_000392_540 0.1438674972 - - PREDICTED: hypersensitive-induced response protein 1 [Sesamum indicum]
10 Hb_005545_110 0.1452687479 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
11 Hb_000300_420 0.1484925321 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
12 Hb_026198_020 0.1500641654 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
13 Hb_010968_030 0.1511477302 - - PREDICTED: uncharacterized protein LOC105643149 [Jatropha curcas]
14 Hb_008304_050 0.1518890236 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
15 Hb_002495_030 0.1543127558 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
16 Hb_000011_320 0.1546734501 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
17 Hb_003052_080 0.1564045702 desease resistance Gene Name: PRK PREDICTED: uridine-cytidine kinase C [Jatropha curcas]
18 Hb_090390_010 0.1588712345 - - hypothetical protein POPTR_0006s28850g [Populus trichocarpa]
19 Hb_011224_150 0.1590468954 - - PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Jatropha curcas]
20 Hb_000103_300 0.1594828633 - - PREDICTED: perakine reductase-like [Jatropha curcas]

Gene co-expression network

sample Hb_001269_580 Hb_001269_580 Hb_002890_110 Hb_002890_110 Hb_001269_580--Hb_002890_110 Hb_009122_010 Hb_009122_010 Hb_001269_580--Hb_009122_010 Hb_002750_040 Hb_002750_040 Hb_001269_580--Hb_002750_040 Hb_004117_020 Hb_004117_020 Hb_001269_580--Hb_004117_020 Hb_174541_030 Hb_174541_030 Hb_001269_580--Hb_174541_030 Hb_002203_020 Hb_002203_020 Hb_001269_580--Hb_002203_020 Hb_011224_150 Hb_011224_150 Hb_002890_110--Hb_011224_150 Hb_000392_540 Hb_000392_540 Hb_002890_110--Hb_000392_540 Hb_002890_110--Hb_009122_010 Hb_142056_010 Hb_142056_010 Hb_002890_110--Hb_142056_010 Hb_002890_110--Hb_002750_040 Hb_002374_510 Hb_002374_510 Hb_009122_010--Hb_002374_510 Hb_001410_080 Hb_001410_080 Hb_009122_010--Hb_001410_080 Hb_008304_050 Hb_008304_050 Hb_009122_010--Hb_008304_050 Hb_009122_010--Hb_002750_040 Hb_113766_010 Hb_113766_010 Hb_009122_010--Hb_113766_010 Hb_026198_020 Hb_026198_020 Hb_002750_040--Hb_026198_020 Hb_002750_040--Hb_113766_010 Hb_001404_070 Hb_001404_070 Hb_002750_040--Hb_001404_070 Hb_002391_240 Hb_002391_240 Hb_002750_040--Hb_002391_240 Hb_004117_020--Hb_174541_030 Hb_004117_020--Hb_002203_020 Hb_002384_030 Hb_002384_030 Hb_004117_020--Hb_002384_030 Hb_001360_020 Hb_001360_020 Hb_004117_020--Hb_001360_020 Hb_000028_550 Hb_000028_550 Hb_004117_020--Hb_000028_550 Hb_155666_010 Hb_155666_010 Hb_004117_020--Hb_155666_010 Hb_030565_100 Hb_030565_100 Hb_174541_030--Hb_030565_100 Hb_000457_120 Hb_000457_120 Hb_174541_030--Hb_000457_120 Hb_000030_130 Hb_000030_130 Hb_174541_030--Hb_000030_130 Hb_174541_030--Hb_002203_020 Hb_174541_030--Hb_000392_540 Hb_005000_280 Hb_005000_280 Hb_002203_020--Hb_005000_280 Hb_002809_080 Hb_002809_080 Hb_002203_020--Hb_002809_080 Hb_000076_280 Hb_000076_280 Hb_002203_020--Hb_000076_280 Hb_001769_070 Hb_001769_070 Hb_002203_020--Hb_001769_070 Hb_027400_020 Hb_027400_020 Hb_002203_020--Hb_027400_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.67332 16.3337 11.5926 119.987 0.42067 0.251922
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.22546 0.811006 2.96825 37.2567 54.2463

CAGE analysis