Hb_155666_010

Information

Type -
Description -
Location Contig155666: 1073-2332
Sequence    

Annotation

kegg
ID pxb:103958645
description protein MID1-COMPLEMENTING ACTIVITY 2-like
nr
ID KDP44714.1
description hypothetical protein JCGZ_01214 [Jatropha curcas]
swissprot
ID Q8L7E9
description Protein MID1-COMPLEMENTING ACTIVITY 1 OS=Arabidopsis thaliana GN=MCA1 PE=1 SV=1
trembl
ID A0A067LK97
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01214 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155666_010 0.0 - - hypothetical protein JCGZ_01214 [Jatropha curcas]
2 Hb_004117_020 0.1151875495 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001410_080 0.1243574613 - - ring finger protein, putative [Ricinus communis]
4 Hb_012410_010 0.1266291013 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
5 Hb_141194_020 0.1292569376 - - carbohydrate transporter, putative [Ricinus communis]
6 Hb_002391_240 0.1355479572 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002370_050 0.1402812326 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
8 Hb_002384_030 0.140481345 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000103_300 0.1410153243 - - PREDICTED: perakine reductase-like [Jatropha curcas]
10 Hb_006154_010 0.1423264165 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
11 Hb_004625_020 0.1424582102 - - PREDICTED: nucleobase-ascorbate transporter 4 [Jatropha curcas]
12 Hb_142056_010 0.1440379241 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
13 Hb_000076_280 0.1488466634 - - PREDICTED: pectinesterase-like [Populus euphratica]
14 Hb_000659_050 0.1499327851 - - PREDICTED: basic blue protein-like [Jatropha curcas]
15 Hb_000910_030 0.1507371973 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000344_030 0.1509960867 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
17 Hb_002809_080 0.1532830017 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003376_140 0.1547756381 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
19 Hb_002000_100 0.1562390868 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
20 Hb_008731_010 0.156880941 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]

Gene co-expression network

sample Hb_155666_010 Hb_155666_010 Hb_004117_020 Hb_004117_020 Hb_155666_010--Hb_004117_020 Hb_001410_080 Hb_001410_080 Hb_155666_010--Hb_001410_080 Hb_012410_010 Hb_012410_010 Hb_155666_010--Hb_012410_010 Hb_141194_020 Hb_141194_020 Hb_155666_010--Hb_141194_020 Hb_002391_240 Hb_002391_240 Hb_155666_010--Hb_002391_240 Hb_002370_050 Hb_002370_050 Hb_155666_010--Hb_002370_050 Hb_174541_030 Hb_174541_030 Hb_004117_020--Hb_174541_030 Hb_002203_020 Hb_002203_020 Hb_004117_020--Hb_002203_020 Hb_002384_030 Hb_002384_030 Hb_004117_020--Hb_002384_030 Hb_001360_020 Hb_001360_020 Hb_004117_020--Hb_001360_020 Hb_000028_550 Hb_000028_550 Hb_004117_020--Hb_000028_550 Hb_000910_030 Hb_000910_030 Hb_001410_080--Hb_000910_030 Hb_001268_290 Hb_001268_290 Hb_001410_080--Hb_001268_290 Hb_005332_160 Hb_005332_160 Hb_001410_080--Hb_005332_160 Hb_001410_080--Hb_141194_020 Hb_006386_010 Hb_006386_010 Hb_001410_080--Hb_006386_010 Hb_169077_030 Hb_169077_030 Hb_001410_080--Hb_169077_030 Hb_022693_090 Hb_022693_090 Hb_012410_010--Hb_022693_090 Hb_004625_020 Hb_004625_020 Hb_012410_010--Hb_004625_020 Hb_152914_010 Hb_152914_010 Hb_012410_010--Hb_152914_010 Hb_000453_290 Hb_000453_290 Hb_012410_010--Hb_000453_290 Hb_000367_320 Hb_000367_320 Hb_012410_010--Hb_000367_320 Hb_141194_020--Hb_005332_160 Hb_003376_140 Hb_003376_140 Hb_141194_020--Hb_003376_140 Hb_141194_020--Hb_169077_030 Hb_007370_010 Hb_007370_010 Hb_141194_020--Hb_007370_010 Hb_141194_020--Hb_000910_030 Hb_000193_070 Hb_000193_070 Hb_002391_240--Hb_000193_070 Hb_000103_300 Hb_000103_300 Hb_002391_240--Hb_000103_300 Hb_000152_570 Hb_000152_570 Hb_002391_240--Hb_000152_570 Hb_002284_060 Hb_002284_060 Hb_002391_240--Hb_002284_060 Hb_113766_010 Hb_113766_010 Hb_002391_240--Hb_113766_010 Hb_002391_240--Hb_007370_010 Hb_007237_080 Hb_007237_080 Hb_002370_050--Hb_007237_080 Hb_002809_080 Hb_002809_080 Hb_002370_050--Hb_002809_080 Hb_031224_010 Hb_031224_010 Hb_002370_050--Hb_031224_010 Hb_000329_010 Hb_000329_010 Hb_002370_050--Hb_000329_010 Hb_027405_010 Hb_027405_010 Hb_002370_050--Hb_027405_010 Hb_026144_040 Hb_026144_040 Hb_002370_050--Hb_026144_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.283273 0.311368 2.27559 0.120764 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.434728 0.773693

CAGE analysis