Hb_003376_140

Information

Type -
Description -
Location Contig3376: 103892-105577
Sequence    

Annotation

kegg
ID cic:CICLE_v10011186mg
description hypothetical protein
nr
ID XP_012082318.1
description PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
swissprot
ID Q9LFH9
description L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana GN=LECRK81 PE=2 SV=1
trembl
ID A0A067K9X6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16484 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35334: 103776-104023
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003376_140 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
2 Hb_004531_160 0.0724878562 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
3 Hb_006788_110 0.0768123661 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
4 Hb_006154_010 0.077847644 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
5 Hb_169077_030 0.082531321 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
6 Hb_000193_070 0.0829726681 - - hypothetical protein JCGZ_25373 [Jatropha curcas]
7 Hb_000103_300 0.0885048659 - - PREDICTED: perakine reductase-like [Jatropha curcas]
8 Hb_001079_050 0.0885239558 - - Calmodulin, putative [Ricinus communis]
9 Hb_141194_020 0.0901942614 - - carbohydrate transporter, putative [Ricinus communis]
10 Hb_000152_570 0.0944705403 - - 21 kDa protein precursor, putative [Ricinus communis]
11 Hb_010142_060 0.0958229916 - - Blue copper protein precursor, putative [Ricinus communis]
12 Hb_005332_160 0.1004321452 - - PREDICTED: BAG family molecular chaperone regulator 2-like [Jatropha curcas]
13 Hb_000395_310 0.1022362808 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_001534_140 0.1050903731 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
15 Hb_012395_060 0.1060229197 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
16 Hb_001410_080 0.1084712183 - - ring finger protein, putative [Ricinus communis]
17 Hb_003607_090 0.1128130641 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
18 Hb_000676_230 0.1136009615 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
19 Hb_005648_020 0.1139060921 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
20 Hb_002384_030 0.1157643499 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003376_140 Hb_003376_140 Hb_004531_160 Hb_004531_160 Hb_003376_140--Hb_004531_160 Hb_006788_110 Hb_006788_110 Hb_003376_140--Hb_006788_110 Hb_006154_010 Hb_006154_010 Hb_003376_140--Hb_006154_010 Hb_169077_030 Hb_169077_030 Hb_003376_140--Hb_169077_030 Hb_000193_070 Hb_000193_070 Hb_003376_140--Hb_000193_070 Hb_000103_300 Hb_000103_300 Hb_003376_140--Hb_000103_300 Hb_010142_060 Hb_010142_060 Hb_004531_160--Hb_010142_060 Hb_001079_050 Hb_001079_050 Hb_004531_160--Hb_001079_050 Hb_003607_090 Hb_003607_090 Hb_004531_160--Hb_003607_090 Hb_002600_120 Hb_002600_120 Hb_004531_160--Hb_002600_120 Hb_005648_020 Hb_005648_020 Hb_004531_160--Hb_005648_020 Hb_033312_070 Hb_033312_070 Hb_006788_110--Hb_033312_070 Hb_000735_020 Hb_000735_020 Hb_006788_110--Hb_000735_020 Hb_006788_110--Hb_004531_160 Hb_000984_130 Hb_000984_130 Hb_006788_110--Hb_000984_130 Hb_011918_070 Hb_011918_070 Hb_006788_110--Hb_011918_070 Hb_006154_010--Hb_001079_050 Hb_006154_010--Hb_000103_300 Hb_006154_010--Hb_000193_070 Hb_006154_010--Hb_169077_030 Hb_000152_570 Hb_000152_570 Hb_006154_010--Hb_000152_570 Hb_007370_010 Hb_007370_010 Hb_169077_030--Hb_007370_010 Hb_012395_060 Hb_012395_060 Hb_169077_030--Hb_012395_060 Hb_169077_030--Hb_000152_570 Hb_169077_030--Hb_000193_070 Hb_005332_160 Hb_005332_160 Hb_169077_030--Hb_005332_160 Hb_000193_070--Hb_000152_570 Hb_002391_240 Hb_002391_240 Hb_000193_070--Hb_002391_240 Hb_000193_070--Hb_000103_300 Hb_002284_060 Hb_002284_060 Hb_000193_070--Hb_002284_060 Hb_000103_300--Hb_000152_570 Hb_000103_300--Hb_002284_060 Hb_000103_300--Hb_002391_240 Hb_000103_300--Hb_169077_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.269217 2.73525 7.41054 31.1935 0.0802805 0.112945
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0273278 0.0215008 0.0405644 4.34473 12.5165

CAGE analysis