Hb_169077_030

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig169077: 10108-16572
Sequence    

Annotation

kegg
ID rcu:RCOM_0454760
description hypothetical protein
nr
ID XP_012065256.1
description PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
swissprot
ID Q8W4J9
description Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8 PE=1 SV=2
trembl
ID B9SU15
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0454760 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169077_030 0.0 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
2 Hb_007370_010 0.0685017927 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
3 Hb_012395_060 0.0696495487 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
4 Hb_000152_570 0.0732493177 - - 21 kDa protein precursor, putative [Ricinus communis]
5 Hb_006154_010 0.0800638821 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
6 Hb_000193_070 0.0808417266 - - hypothetical protein JCGZ_25373 [Jatropha curcas]
7 Hb_005332_160 0.0811134213 - - PREDICTED: BAG family molecular chaperone regulator 2-like [Jatropha curcas]
8 Hb_000103_300 0.0821874799 - - PREDICTED: perakine reductase-like [Jatropha curcas]
9 Hb_001534_140 0.0822482338 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
10 Hb_003376_140 0.082531321 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
11 Hb_004804_010 0.0838614292 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
12 Hb_001079_050 0.0850337353 - - Calmodulin, putative [Ricinus communis]
13 Hb_141194_020 0.0912603622 - - carbohydrate transporter, putative [Ricinus communis]
14 Hb_001410_080 0.0941759571 - - ring finger protein, putative [Ricinus communis]
15 Hb_002391_240 0.102374804 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004466_090 0.1037499544 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003894_180 0.104912303 - - PREDICTED: uncharacterized protein LOC104245193, partial [Nicotiana sylvestris]
18 Hb_002284_060 0.1060397836 - - sugar transporter, putative [Ricinus communis]
19 Hb_138585_010 0.1062260675 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
20 Hb_004531_160 0.1087389843 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_169077_030 Hb_169077_030 Hb_007370_010 Hb_007370_010 Hb_169077_030--Hb_007370_010 Hb_012395_060 Hb_012395_060 Hb_169077_030--Hb_012395_060 Hb_000152_570 Hb_000152_570 Hb_169077_030--Hb_000152_570 Hb_006154_010 Hb_006154_010 Hb_169077_030--Hb_006154_010 Hb_000193_070 Hb_000193_070 Hb_169077_030--Hb_000193_070 Hb_005332_160 Hb_005332_160 Hb_169077_030--Hb_005332_160 Hb_003633_170 Hb_003633_170 Hb_007370_010--Hb_003633_170 Hb_003894_180 Hb_003894_180 Hb_007370_010--Hb_003894_180 Hb_007370_010--Hb_000152_570 Hb_031224_010 Hb_031224_010 Hb_007370_010--Hb_031224_010 Hb_000103_300 Hb_000103_300 Hb_007370_010--Hb_000103_300 Hb_004804_010 Hb_004804_010 Hb_012395_060--Hb_004804_010 Hb_001269_660 Hb_001269_660 Hb_012395_060--Hb_001269_660 Hb_001534_140 Hb_001534_140 Hb_012395_060--Hb_001534_140 Hb_138585_010 Hb_138585_010 Hb_012395_060--Hb_138585_010 Hb_012395_060--Hb_000152_570 Hb_000152_570--Hb_000103_300 Hb_000152_570--Hb_000193_070 Hb_002284_060 Hb_002284_060 Hb_000152_570--Hb_002284_060 Hb_002391_240 Hb_002391_240 Hb_000152_570--Hb_002391_240 Hb_000152_570--Hb_003894_180 Hb_001079_050 Hb_001079_050 Hb_006154_010--Hb_001079_050 Hb_006154_010--Hb_000103_300 Hb_006154_010--Hb_000193_070 Hb_003376_140 Hb_003376_140 Hb_006154_010--Hb_003376_140 Hb_006154_010--Hb_000152_570 Hb_000193_070--Hb_002391_240 Hb_000193_070--Hb_000103_300 Hb_000193_070--Hb_002284_060 Hb_003607_090 Hb_003607_090 Hb_005332_160--Hb_003607_090 Hb_000910_030 Hb_000910_030 Hb_005332_160--Hb_000910_030 Hb_005332_160--Hb_001534_140 Hb_001410_080 Hb_001410_080 Hb_005332_160--Hb_001410_080 Hb_141194_020 Hb_141194_020 Hb_005332_160--Hb_141194_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0245393 0.078604 0.301487 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0527185 0.153065

CAGE analysis