Hb_011344_100

Information

Type -
Description -
Location Contig11344: 54596-55575
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011344_100 0.0 - - -
2 Hb_001907_130 0.1737315676 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
3 Hb_170516_010 0.1829819215 - - hypothetical protein MTR_001s0023 [Medicago truncatula]
4 Hb_115116_010 0.243431897 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
5 Hb_065452_010 0.2555554043 - - conserved hypothetical protein [Ricinus communis]
6 Hb_033594_090 0.2556180659 - - -
7 Hb_005464_010 0.2677763296 - - Thioredoxin H-type, putative [Ricinus communis]
8 Hb_001269_280 0.2817738672 - - -
9 Hb_002588_020 0.2822572631 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
10 Hb_005181_200 0.2874300127 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
11 Hb_121921_010 0.2921895291 - - -
12 Hb_000739_230 0.3024057399 - - PREDICTED: AT-hook motif nuclear-localized protein 22 [Jatropha curcas]
13 Hb_001749_030 0.3105309128 - - -
14 Hb_002805_100 0.3232320568 - - Receptor-like protein 12 [Morus notabilis]
15 Hb_137914_010 0.3237694149 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
16 Hb_000608_220 0.3286626745 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
17 Hb_005675_060 0.3305504746 - - PREDICTED: protein NIM1-INTERACTING 2 [Jatropha curcas]
18 Hb_022425_010 0.3308714355 - - Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis]
19 Hb_004586_330 0.3355069468 - - conserved hypothetical protein [Ricinus communis]
20 Hb_115445_010 0.3408084876 - - -

Gene co-expression network

sample Hb_011344_100 Hb_011344_100 Hb_001907_130 Hb_001907_130 Hb_011344_100--Hb_001907_130 Hb_170516_010 Hb_170516_010 Hb_011344_100--Hb_170516_010 Hb_115116_010 Hb_115116_010 Hb_011344_100--Hb_115116_010 Hb_065452_010 Hb_065452_010 Hb_011344_100--Hb_065452_010 Hb_033594_090 Hb_033594_090 Hb_011344_100--Hb_033594_090 Hb_005464_010 Hb_005464_010 Hb_011344_100--Hb_005464_010 Hb_001907_130--Hb_170516_010 Hb_001907_130--Hb_115116_010 Hb_005675_060 Hb_005675_060 Hb_001907_130--Hb_005675_060 Hb_001907_130--Hb_065452_010 Hb_000803_310 Hb_000803_310 Hb_001907_130--Hb_000803_310 Hb_170516_010--Hb_115116_010 Hb_135569_010 Hb_135569_010 Hb_170516_010--Hb_135569_010 Hb_001749_030 Hb_001749_030 Hb_170516_010--Hb_001749_030 Hb_115445_010 Hb_115445_010 Hb_170516_010--Hb_115445_010 Hb_000413_150 Hb_000413_150 Hb_115116_010--Hb_000413_150 Hb_115116_010--Hb_005675_060 Hb_014919_020 Hb_014919_020 Hb_115116_010--Hb_014919_020 Hb_001882_150 Hb_001882_150 Hb_065452_010--Hb_001882_150 Hb_065452_010--Hb_115445_010 Hb_002217_490 Hb_002217_490 Hb_065452_010--Hb_002217_490 Hb_030694_010 Hb_030694_010 Hb_065452_010--Hb_030694_010 Hb_065452_010--Hb_005675_060 Hb_003702_070 Hb_003702_070 Hb_033594_090--Hb_003702_070 Hb_069659_010 Hb_069659_010 Hb_033594_090--Hb_069659_010 Hb_000309_060 Hb_000309_060 Hb_033594_090--Hb_000309_060 Hb_001855_020 Hb_001855_020 Hb_033594_090--Hb_001855_020 Hb_027337_060 Hb_027337_060 Hb_033594_090--Hb_027337_060 Hb_001369_530 Hb_001369_530 Hb_005464_010--Hb_001369_530 Hb_000270_550 Hb_000270_550 Hb_005464_010--Hb_000270_550 Hb_004631_030 Hb_004631_030 Hb_005464_010--Hb_004631_030 Hb_000510_210 Hb_000510_210 Hb_005464_010--Hb_000510_210 Hb_000566_170 Hb_000566_170 Hb_005464_010--Hb_000566_170 Hb_002054_090 Hb_002054_090 Hb_005464_010--Hb_002054_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.113432 0.101412 0.292838 0.245376 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.212163 0

CAGE analysis