Hb_014720_070

Information

Type -
Description -
Location Contig14720: 102896-116147
Sequence    

Annotation

kegg
ID rcu:RCOM_1510490
description Pantothenate kinase, putative (EC:2.7.1.33)
nr
ID XP_012080051.1
description PREDICTED: pantothenate kinase 2 [Jatropha curcas]
swissprot
ID Q8L5Y9
description Pantothenate kinase 2 OS=Arabidopsis thaliana GN=PANK2 PE=1 SV=2
trembl
ID A0A067K4M4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11468 PE=4 SV=1
Gene Ontology
ID GO:0005829
description pantothenate kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11958: 103440-105047 , PASA_asmbl_11959: 102918-115364 , PASA_asmbl_11961: 104666-104922 , PASA_asmbl_11962: 117141-118973
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014720_070 0.0 - - PREDICTED: pantothenate kinase 2 [Jatropha curcas]
2 Hb_006816_090 0.1154764171 - - PREDICTED: uncharacterized protein LOC105647425 isoform X2 [Jatropha curcas]
3 Hb_001205_300 0.1162351555 - - glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
4 Hb_001348_190 0.1171103285 - - PREDICTED: chlorophyllide a oxygenase, chloroplastic [Jatropha curcas]
5 Hb_000640_160 0.1210503092 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
6 Hb_002874_180 0.1220582698 - - PREDICTED: protein AIG2-like isoform X1 [Jatropha curcas]
7 Hb_000072_090 0.1259847971 - - PREDICTED: SEC14 cytosolic factor [Jatropha curcas]
8 Hb_021650_010 0.1261026125 - - hypothetical protein JCGZ_09648 [Jatropha curcas]
9 Hb_138435_010 0.1265123855 transcription factor TF Family: SWI/SNF-BAF60b brg-1 associated factor, putative [Ricinus communis]
10 Hb_001824_080 0.1308081224 - - PREDICTED: 2-aminoethanethiol dioxygenase isoform X1 [Jatropha curcas]
11 Hb_002498_140 0.1309094225 - - PREDICTED: peroxisomal membrane protein PMP22-like isoform X1 [Solanum lycopersicum]
12 Hb_077026_010 0.131142801 - - PREDICTED: phosphatidylinositol 4-kinase alpha 2 [Jatropha curcas]
13 Hb_032202_180 0.1319690695 - - PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Jatropha curcas]
14 Hb_000071_150 0.1320554269 - - Stearoy-ACP desaturase [Ricinus communis]
15 Hb_000365_100 0.1320755018 - - PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Jatropha curcas]
16 Hb_006570_010 0.13229751 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001022_030 0.1332802611 - - PREDICTED: sorting nexin 1 [Jatropha curcas]
18 Hb_005731_110 0.1333227707 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
19 Hb_000103_120 0.1336547826 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
20 Hb_000802_130 0.1343681347 - - hypothetical protein JCGZ_04636 [Jatropha curcas]

Gene co-expression network

sample Hb_014720_070 Hb_014720_070 Hb_006816_090 Hb_006816_090 Hb_014720_070--Hb_006816_090 Hb_001205_300 Hb_001205_300 Hb_014720_070--Hb_001205_300 Hb_001348_190 Hb_001348_190 Hb_014720_070--Hb_001348_190 Hb_000640_160 Hb_000640_160 Hb_014720_070--Hb_000640_160 Hb_002874_180 Hb_002874_180 Hb_014720_070--Hb_002874_180 Hb_000072_090 Hb_000072_090 Hb_014720_070--Hb_000072_090 Hb_000136_110 Hb_000136_110 Hb_006816_090--Hb_000136_110 Hb_002811_270 Hb_002811_270 Hb_006816_090--Hb_002811_270 Hb_006816_090--Hb_000072_090 Hb_000207_300 Hb_000207_300 Hb_006816_090--Hb_000207_300 Hb_001472_060 Hb_001472_060 Hb_006816_090--Hb_001472_060 Hb_000028_520 Hb_000028_520 Hb_006816_090--Hb_000028_520 Hb_003462_070 Hb_003462_070 Hb_001205_300--Hb_003462_070 Hb_031284_070 Hb_031284_070 Hb_001205_300--Hb_031284_070 Hb_000046_330 Hb_000046_330 Hb_001205_300--Hb_000046_330 Hb_000740_050 Hb_000740_050 Hb_001205_300--Hb_000740_050 Hb_009225_020 Hb_009225_020 Hb_001205_300--Hb_009225_020 Hb_000948_170 Hb_000948_170 Hb_001205_300--Hb_000948_170 Hb_000559_020 Hb_000559_020 Hb_001348_190--Hb_000559_020 Hb_000703_290 Hb_000703_290 Hb_001348_190--Hb_000703_290 Hb_002686_240 Hb_002686_240 Hb_001348_190--Hb_002686_240 Hb_004096_240 Hb_004096_240 Hb_001348_190--Hb_004096_240 Hb_003752_070 Hb_003752_070 Hb_001348_190--Hb_003752_070 Hb_001348_190--Hb_000640_160 Hb_003225_020 Hb_003225_020 Hb_000640_160--Hb_003225_020 Hb_005731_110 Hb_005731_110 Hb_000640_160--Hb_005731_110 Hb_001619_050 Hb_001619_050 Hb_000640_160--Hb_001619_050 Hb_032202_080 Hb_032202_080 Hb_000640_160--Hb_032202_080 Hb_000640_160--Hb_004096_240 Hb_138435_010 Hb_138435_010 Hb_000640_160--Hb_138435_010 Hb_001022_030 Hb_001022_030 Hb_002874_180--Hb_001022_030 Hb_077026_010 Hb_077026_010 Hb_002874_180--Hb_077026_010 Hb_000058_130 Hb_000058_130 Hb_002874_180--Hb_000058_130 Hb_000003_170 Hb_000003_170 Hb_002874_180--Hb_000003_170 Hb_002874_180--Hb_000028_520 Hb_000003_780 Hb_000003_780 Hb_002874_180--Hb_000003_780 Hb_000071_150 Hb_000071_150 Hb_000072_090--Hb_000071_150 Hb_000072_090--Hb_000136_110 Hb_171334_010 Hb_171334_010 Hb_000072_090--Hb_171334_010 Hb_000072_090--Hb_001472_060 Hb_001014_100 Hb_001014_100 Hb_000072_090--Hb_001014_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.97739 7.58616 29.2188 12.0351 12.9755 19.4246
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.3743 5.77894 10.6976 5.67 17.6035

CAGE analysis