Hb_010632_010

Information

Type -
Description -
Location Contig10632: 13353-18298
Sequence    

Annotation

kegg
ID cic:CICLE_v10007423mg
description hypothetical protein
nr
ID XP_012089654.1
description PREDICTED: bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Jatropha curcas]
swissprot
ID B0F481
description Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=BIO3-BIO1 PE=1 SV=1
trembl
ID A0A067JJD0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01765 PE=3 SV=1
Gene Ontology
ID GO:0008483
description bifunctional dethiobiotin synthetase -diamino-pelargonic acid mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02013: 13518-13634 , PASA_asmbl_02014: 14110-14945 , PASA_asmbl_02015: 16316-41145
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010632_010 0.0 - - PREDICTED: bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Jatropha curcas]
2 Hb_000963_090 0.1159415535 rubber biosynthesis Gene Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea brasiliensis]
3 Hb_001365_020 0.1230433247 - - hypothetical protein PRUPE_ppa000927mg [Prunus persica]
4 Hb_000163_110 0.123902379 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
5 Hb_000853_050 0.125527147 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_001425_010 0.1265571036 - - sugar transporter, putative [Ricinus communis]
7 Hb_010632_020 0.1271490958 - - hypothetical protein POPTR_0006s185902g, partial [Populus trichocarpa]
8 Hb_000997_290 0.1324708661 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
9 Hb_002811_190 0.1364223696 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
10 Hb_012033_010 0.1372063576 - - PREDICTED: histone H1.2-like [Jatropha curcas]
11 Hb_001360_030 0.1436436416 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
12 Hb_005276_070 0.1460525456 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
13 Hb_000329_080 0.1484021794 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
14 Hb_001821_060 0.1488078563 - - PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Jatropha curcas]
15 Hb_001365_030 0.1490831685 - - PREDICTED: uncharacterized protein LOC102609547 [Citrus sinensis]
16 Hb_002811_200 0.1500380836 - - PREDICTED: protein IQ-DOMAIN 14-like [Jatropha curcas]
17 Hb_000803_220 0.1520983553 - - PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic [Jatropha curcas]
18 Hb_000608_360 0.15269677 - - calreticulin, putative [Ricinus communis]
19 Hb_007765_130 0.1555713867 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
20 Hb_008616_040 0.1556447982 - - PREDICTED: RNA-binding protein CP33, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_010632_010 Hb_010632_010 Hb_000963_090 Hb_000963_090 Hb_010632_010--Hb_000963_090 Hb_001365_020 Hb_001365_020 Hb_010632_010--Hb_001365_020 Hb_000163_110 Hb_000163_110 Hb_010632_010--Hb_000163_110 Hb_000853_050 Hb_000853_050 Hb_010632_010--Hb_000853_050 Hb_001425_010 Hb_001425_010 Hb_010632_010--Hb_001425_010 Hb_010632_020 Hb_010632_020 Hb_010632_010--Hb_010632_020 Hb_078477_060 Hb_078477_060 Hb_000963_090--Hb_078477_060 Hb_000329_080 Hb_000329_080 Hb_000963_090--Hb_000329_080 Hb_002811_190 Hb_002811_190 Hb_000963_090--Hb_002811_190 Hb_001811_080 Hb_001811_080 Hb_000963_090--Hb_001811_080 Hb_001080_150 Hb_001080_150 Hb_000963_090--Hb_001080_150 Hb_001365_010 Hb_001365_010 Hb_001365_020--Hb_001365_010 Hb_000441_050 Hb_000441_050 Hb_001365_020--Hb_000441_050 Hb_003053_070 Hb_003053_070 Hb_001365_020--Hb_003053_070 Hb_005977_060 Hb_005977_060 Hb_001365_020--Hb_005977_060 Hb_001365_020--Hb_000163_110 Hb_005276_070 Hb_005276_070 Hb_001365_020--Hb_005276_070 Hb_000163_110--Hb_000329_080 Hb_000163_110--Hb_001365_010 Hb_000163_110--Hb_000441_050 Hb_000163_110--Hb_005977_060 Hb_000300_680 Hb_000300_680 Hb_000163_110--Hb_000300_680 Hb_006277_080 Hb_006277_080 Hb_000853_050--Hb_006277_080 Hb_007765_130 Hb_007765_130 Hb_000853_050--Hb_007765_130 Hb_003141_060 Hb_003141_060 Hb_000853_050--Hb_003141_060 Hb_001227_140 Hb_001227_140 Hb_000853_050--Hb_001227_140 Hb_025045_010 Hb_025045_010 Hb_000853_050--Hb_025045_010 Hb_018043_020 Hb_018043_020 Hb_001425_010--Hb_018043_020 Hb_008616_040 Hb_008616_040 Hb_001425_010--Hb_008616_040 Hb_159809_090 Hb_159809_090 Hb_001425_010--Hb_159809_090 Hb_000510_190 Hb_000510_190 Hb_001425_010--Hb_000510_190 Hb_003549_050 Hb_003549_050 Hb_001425_010--Hb_003549_050 Hb_003029_140 Hb_003029_140 Hb_001425_010--Hb_003029_140 Hb_001365_030 Hb_001365_030 Hb_010632_020--Hb_001365_030 Hb_001360_030 Hb_001360_030 Hb_010632_020--Hb_001360_030 Hb_000940_030 Hb_000940_030 Hb_010632_020--Hb_000940_030 Hb_002374_450 Hb_002374_450 Hb_010632_020--Hb_002374_450 Hb_010632_020--Hb_003053_070 Hb_010632_020--Hb_005276_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.848391 2.02315 5.83711 2.78955 0.579482 0.583145
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.333534 0.349885 0.288654 4.6812 10.4266

CAGE analysis