Hb_008864_030

Information

Type -
Description -
Location Contig8864: 19220-19477
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61503: 19912-20167
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008864_030 0.0 - - -
2 Hb_003014_020 0.2490442153 - - electron transporter, putative [Ricinus communis]
3 Hb_026048_050 0.2510052032 - - PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
4 Hb_001804_030 0.3093379037 - - kinase, putative [Ricinus communis]
5 Hb_004450_050 0.312330608 - - PREDICTED: histone chaperone ASF1B [Populus euphratica]
6 Hb_024682_020 0.3148999531 - - hypothetical protein POPTR_0001s12710g [Populus trichocarpa]
7 Hb_002506_090 0.3156243264 - - -
8 Hb_000953_130 0.3160072816 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
9 Hb_000613_210 0.3181864037 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
10 Hb_006441_020 0.3184917773 - - PREDICTED: cadmium/zinc-transporting ATPase HMA3-like isoform X2 [Populus euphratica]
11 Hb_024879_010 0.3215870201 - - unknown [Glycine max]
12 Hb_000676_280 0.32576861 - - ATP binding protein, putative [Ricinus communis]
13 Hb_000739_200 0.3265912868 transcription factor TF Family: LOB hypothetical protein CICLE_v10021992mg [Citrus clementina]
14 Hb_000367_070 0.330252297 - - hypothetical protein JCGZ_11697 [Jatropha curcas]
15 Hb_002759_090 0.3307234138 - - -
16 Hb_006452_220 0.3325519057 - - PREDICTED: uncharacterized protein LOC105635043 [Jatropha curcas]
17 Hb_002774_140 0.3353902987 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
18 Hb_058620_060 0.3360579607 - - uncharacterized protein LOC105646159 precursor [Jatropha curcas]
19 Hb_000245_080 0.3410516872 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-15 [Jatropha curcas]
20 Hb_010519_040 0.344603626 - - PREDICTED: uncharacterized protein LOC105643567 [Jatropha curcas]

Gene co-expression network

sample Hb_008864_030 Hb_008864_030 Hb_003014_020 Hb_003014_020 Hb_008864_030--Hb_003014_020 Hb_026048_050 Hb_026048_050 Hb_008864_030--Hb_026048_050 Hb_001804_030 Hb_001804_030 Hb_008864_030--Hb_001804_030 Hb_004450_050 Hb_004450_050 Hb_008864_030--Hb_004450_050 Hb_024682_020 Hb_024682_020 Hb_008864_030--Hb_024682_020 Hb_002506_090 Hb_002506_090 Hb_008864_030--Hb_002506_090 Hb_003014_020--Hb_004450_050 Hb_003014_020--Hb_024682_020 Hb_000891_030 Hb_000891_030 Hb_003014_020--Hb_000891_030 Hb_010519_040 Hb_010519_040 Hb_003014_020--Hb_010519_040 Hb_091889_020 Hb_091889_020 Hb_003014_020--Hb_091889_020 Hb_006441_020 Hb_006441_020 Hb_003014_020--Hb_006441_020 Hb_000953_130 Hb_000953_130 Hb_026048_050--Hb_000953_130 Hb_001767_130 Hb_001767_130 Hb_026048_050--Hb_001767_130 Hb_002102_030 Hb_002102_030 Hb_026048_050--Hb_002102_030 Hb_006698_040 Hb_006698_040 Hb_026048_050--Hb_006698_040 Hb_005183_170 Hb_005183_170 Hb_026048_050--Hb_005183_170 Hb_011671_080 Hb_011671_080 Hb_026048_050--Hb_011671_080 Hb_006538_160 Hb_006538_160 Hb_001804_030--Hb_006538_160 Hb_001268_320 Hb_001268_320 Hb_001804_030--Hb_001268_320 Hb_034299_070 Hb_034299_070 Hb_001804_030--Hb_034299_070 Hb_001946_370 Hb_001946_370 Hb_001804_030--Hb_001946_370 Hb_000210_190 Hb_000210_190 Hb_001804_030--Hb_000210_190 Hb_126711_010 Hb_126711_010 Hb_001804_030--Hb_126711_010 Hb_001396_110 Hb_001396_110 Hb_004450_050--Hb_001396_110 Hb_009627_030 Hb_009627_030 Hb_004450_050--Hb_009627_030 Hb_000815_240 Hb_000815_240 Hb_004450_050--Hb_000815_240 Hb_005146_080 Hb_005146_080 Hb_004450_050--Hb_005146_080 Hb_005188_030 Hb_005188_030 Hb_004450_050--Hb_005188_030 Hb_004450_050--Hb_006441_020 Hb_034688_020 Hb_034688_020 Hb_024682_020--Hb_034688_020 Hb_005356_040 Hb_005356_040 Hb_024682_020--Hb_005356_040 Hb_000649_240 Hb_000649_240 Hb_024682_020--Hb_000649_240 Hb_001146_010 Hb_001146_010 Hb_024682_020--Hb_001146_010 Hb_002577_010 Hb_002577_010 Hb_024682_020--Hb_002577_010 Hb_010050_050 Hb_010050_050 Hb_024682_020--Hb_010050_050 Hb_000815_060 Hb_000815_060 Hb_002506_090--Hb_000815_060 Hb_150930_010 Hb_150930_010 Hb_002506_090--Hb_150930_010 Hb_002506_060 Hb_002506_060 Hb_002506_090--Hb_002506_060 Hb_002447_080 Hb_002447_080 Hb_002506_090--Hb_002447_080 Hb_000696_160 Hb_000696_160 Hb_002506_090--Hb_000696_160 Hb_000003_720 Hb_000003_720 Hb_002506_090--Hb_000003_720
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.45268 2.07997 0.224909 5.68749 0.953248 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 3.59822 1.16925 1.68557 0.62788

CAGE analysis