Hb_026048_050

Information

Type -
Description -
Location Contig26048: 75465-76990
Sequence    

Annotation

kegg
ID pop:POPTR_0003s13330g
description POPTRDRAFT_646680; hypothetical protein
nr
ID XP_012086806.1
description PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
swissprot
ID Q9SH58
description Probable membrane-associated kinase regulator 2 OS=Arabidopsis thaliana GN=MAKR2 PE=2 SV=1
trembl
ID A0A067JRC6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20524 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27158: 75398-76606
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026048_050 0.0 - - PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
2 Hb_000953_130 0.1649704736 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
3 Hb_001767_130 0.1706267272 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
4 Hb_002102_030 0.172978027 - - -
5 Hb_006698_040 0.1786793077 - - bHLH1 transcription factor [Hevea brasiliensis]
6 Hb_005183_170 0.1798282683 - - PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curcas]
7 Hb_011671_080 0.1877728177 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
8 Hb_024879_010 0.1892025243 - - unknown [Glycine max]
9 Hb_004450_050 0.1908504084 - - PREDICTED: histone chaperone ASF1B [Populus euphratica]
10 Hb_000025_630 0.1921785231 - - PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
11 Hb_001008_200 0.192856702 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC103961552 [Pyrus x bretschneideri]
12 Hb_024074_020 0.1944545481 - - PREDICTED: probable serine/threonine-protein kinase At1g09600 [Jatropha curcas]
13 Hb_000071_120 0.1999587239 - - PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
14 Hb_002148_020 0.2009642287 - - aldo-keto reductase, putative [Ricinus communis]
15 Hb_002192_030 0.2018399072 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007638_020 0.2018478927 - - PREDICTED: low-temperature-induced cysteine proteinase-like [Jatropha curcas]
17 Hb_002298_030 0.203101913 - - PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
18 Hb_183610_010 0.2067606307 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
19 Hb_002781_030 0.2072200592 - - protein binding protein, putative [Ricinus communis]
20 Hb_000521_160 0.2077371505 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_026048_050 Hb_026048_050 Hb_000953_130 Hb_000953_130 Hb_026048_050--Hb_000953_130 Hb_001767_130 Hb_001767_130 Hb_026048_050--Hb_001767_130 Hb_002102_030 Hb_002102_030 Hb_026048_050--Hb_002102_030 Hb_006698_040 Hb_006698_040 Hb_026048_050--Hb_006698_040 Hb_005183_170 Hb_005183_170 Hb_026048_050--Hb_005183_170 Hb_011671_080 Hb_011671_080 Hb_026048_050--Hb_011671_080 Hb_007926_050 Hb_007926_050 Hb_000953_130--Hb_007926_050 Hb_000748_030 Hb_000748_030 Hb_000953_130--Hb_000748_030 Hb_000384_070 Hb_000384_070 Hb_000953_130--Hb_000384_070 Hb_000913_040 Hb_000913_040 Hb_000953_130--Hb_000913_040 Hb_019181_030 Hb_019181_030 Hb_000953_130--Hb_019181_030 Hb_005993_010 Hb_005993_010 Hb_000953_130--Hb_005993_010 Hb_088163_010 Hb_088163_010 Hb_001767_130--Hb_088163_010 Hb_001767_130--Hb_002102_030 Hb_000035_200 Hb_000035_200 Hb_001767_130--Hb_000035_200 Hb_131035_010 Hb_131035_010 Hb_001767_130--Hb_131035_010 Hb_002148_020 Hb_002148_020 Hb_001767_130--Hb_002148_020 Hb_003925_020 Hb_003925_020 Hb_001767_130--Hb_003925_020 Hb_002102_030--Hb_000035_200 Hb_000270_520 Hb_000270_520 Hb_002102_030--Hb_000270_520 Hb_002102_030--Hb_131035_010 Hb_000270_510 Hb_000270_510 Hb_002102_030--Hb_000270_510 Hb_003050_390 Hb_003050_390 Hb_002102_030--Hb_003050_390 Hb_084646_010 Hb_084646_010 Hb_006698_040--Hb_084646_010 Hb_001584_120 Hb_001584_120 Hb_006698_040--Hb_001584_120 Hb_155159_020 Hb_155159_020 Hb_006698_040--Hb_155159_020 Hb_000025_630 Hb_000025_630 Hb_006698_040--Hb_000025_630 Hb_187679_010 Hb_187679_010 Hb_006698_040--Hb_187679_010 Hb_172632_120 Hb_172632_120 Hb_006698_040--Hb_172632_120 Hb_183610_010 Hb_183610_010 Hb_005183_170--Hb_183610_010 Hb_000984_310 Hb_000984_310 Hb_005183_170--Hb_000984_310 Hb_003617_020 Hb_003617_020 Hb_005183_170--Hb_003617_020 Hb_004117_120 Hb_004117_120 Hb_005183_170--Hb_004117_120 Hb_001486_190 Hb_001486_190 Hb_005183_170--Hb_001486_190 Hb_005183_170--Hb_011671_080 Hb_000359_310 Hb_000359_310 Hb_011671_080--Hb_000359_310 Hb_004088_040 Hb_004088_040 Hb_011671_080--Hb_004088_040 Hb_001609_040 Hb_001609_040 Hb_011671_080--Hb_001609_040 Hb_000370_020 Hb_000370_020 Hb_011671_080--Hb_000370_020 Hb_000742_020 Hb_000742_020 Hb_011671_080--Hb_000742_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.17951 1.12277 0.899294 5.48455 1.26785 1.24509
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.333264 2.17609 1.67104 1.64435 0.711306

CAGE analysis