Hb_001767_130

Information

Type -
Description -
Location Contig1767: 127624-129686
Sequence    

Annotation

kegg
ID pop:POPTR_0010s21790g
description POPTRDRAFT_1092225; hypothetical protein
nr
ID XP_012072944.1
description PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
swissprot
ID A7WM73
description Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1
trembl
ID A0A067KZW0
description Beta-hexosaminidase OS=Jatropha curcas GN=JCGZ_08410 PE=3 SV=1
Gene Ontology
ID GO:0005773
description beta-hexosaminidase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16960: 121718-129658 , PASA_asmbl_16962: 127605-129695 , PASA_asmbl_16963: 121687-129757 , PASA_asmbl_16964: 121687-129755
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001767_130 0.0 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
2 Hb_088163_010 0.1276044841 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
3 Hb_002102_030 0.1339548026 - - -
4 Hb_000035_200 0.1350562018 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]
5 Hb_131035_010 0.1432011962 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_002148_020 0.1542390949 - - aldo-keto reductase, putative [Ricinus communis]
7 Hb_003925_020 0.1588372714 - - PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Jatropha curcas]
8 Hb_006698_040 0.1594351873 - - bHLH1 transcription factor [Hevea brasiliensis]
9 Hb_004040_030 0.1644035337 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
10 Hb_000172_510 0.1680279706 - - hypothetical protein B456_007G243100 [Gossypium raimondii]
11 Hb_004970_140 0.1698465335 - - PREDICTED: uncharacterized protein LOC105633635 [Jatropha curcas]
12 Hb_026048_050 0.1706267272 - - PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
13 Hb_075764_010 0.1707728971 - - PREDICTED: PRA1 family protein A1-like [Jatropha curcas]
14 Hb_002122_010 0.1720000988 - - -
15 Hb_001051_070 0.1731804951 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
16 Hb_011930_150 0.1759890181 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
17 Hb_007286_020 0.176390654 - - hypothetical protein L484_010675 [Morus notabilis]
18 Hb_000696_010 0.1769698869 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
19 Hb_013749_010 0.1779491607 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006002_040 0.1789174886 - - PREDICTED: uncharacterized protein LOC105638085 [Jatropha curcas]

Gene co-expression network

sample Hb_001767_130 Hb_001767_130 Hb_088163_010 Hb_088163_010 Hb_001767_130--Hb_088163_010 Hb_002102_030 Hb_002102_030 Hb_001767_130--Hb_002102_030 Hb_000035_200 Hb_000035_200 Hb_001767_130--Hb_000035_200 Hb_131035_010 Hb_131035_010 Hb_001767_130--Hb_131035_010 Hb_002148_020 Hb_002148_020 Hb_001767_130--Hb_002148_020 Hb_003925_020 Hb_003925_020 Hb_001767_130--Hb_003925_020 Hb_075764_010 Hb_075764_010 Hb_088163_010--Hb_075764_010 Hb_000230_180 Hb_000230_180 Hb_088163_010--Hb_000230_180 Hb_099878_050 Hb_099878_050 Hb_088163_010--Hb_099878_050 Hb_090158_010 Hb_090158_010 Hb_088163_010--Hb_090158_010 Hb_165402_010 Hb_165402_010 Hb_088163_010--Hb_165402_010 Hb_002102_030--Hb_000035_200 Hb_000270_520 Hb_000270_520 Hb_002102_030--Hb_000270_520 Hb_002102_030--Hb_131035_010 Hb_000270_510 Hb_000270_510 Hb_002102_030--Hb_000270_510 Hb_003050_390 Hb_003050_390 Hb_002102_030--Hb_003050_390 Hb_000146_040 Hb_000146_040 Hb_000035_200--Hb_000146_040 Hb_000696_010 Hb_000696_010 Hb_000035_200--Hb_000696_010 Hb_000035_200--Hb_131035_010 Hb_001500_110 Hb_001500_110 Hb_000035_200--Hb_001500_110 Hb_000035_200--Hb_000270_520 Hb_004970_140 Hb_004970_140 Hb_000035_200--Hb_004970_140 Hb_002192_030 Hb_002192_030 Hb_131035_010--Hb_002192_030 Hb_007286_020 Hb_007286_020 Hb_131035_010--Hb_007286_020 Hb_131035_010--Hb_001500_110 Hb_027760_070 Hb_027760_070 Hb_131035_010--Hb_027760_070 Hb_146081_010 Hb_146081_010 Hb_131035_010--Hb_146081_010 Hb_131967_010 Hb_131967_010 Hb_002148_020--Hb_131967_010 Hb_006698_040 Hb_006698_040 Hb_002148_020--Hb_006698_040 Hb_000025_630 Hb_000025_630 Hb_002148_020--Hb_000025_630 Hb_122548_010 Hb_122548_010 Hb_002148_020--Hb_122548_010 Hb_002148_020--Hb_088163_010 Hb_085972_010 Hb_085972_010 Hb_002148_020--Hb_085972_010 Hb_000264_110 Hb_000264_110 Hb_003925_020--Hb_000264_110 Hb_003925_020--Hb_004970_140 Hb_002150_040 Hb_002150_040 Hb_003925_020--Hb_002150_040 Hb_000915_240 Hb_000915_240 Hb_003925_020--Hb_000915_240 Hb_005218_020 Hb_005218_020 Hb_003925_020--Hb_005218_020 Hb_003929_270 Hb_003929_270 Hb_003925_020--Hb_003929_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.90938 1.04689 1.48478 6.50503 1.42525 2.71962
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.630408 1.4877 2.19089 3.05735 0.397916

CAGE analysis