Hb_000025_630

Information

Type -
Description -
Location Contig25: 577597-577917
Sequence    

Annotation

kegg
ID egr:104418085
description uncharacterized LOC104418085
nr
ID XP_012074486.1
description PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08383 PE=4 SV=1
Gene Ontology
ID GO:0009536
description PREDICTED: uncharacterized protein LOC105635952

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000025_630 0.0 - - PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
2 Hb_172632_120 0.068249979 - - conserved hypothetical protein [Ricinus communis]
3 Hb_012322_020 0.0869795787 - - -
4 Hb_000025_180 0.0882655834 - - hypothetical protein CISIN_1g024241mg [Citrus sinensis]
5 Hb_002235_210 0.0895102077 - - PREDICTED: vesicle transport v-SNARE 13-like [Populus euphratica]
6 Hb_001699_100 0.0909684755 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
7 Hb_007441_190 0.0919944788 - - hypothetical protein CISIN_1g023046mg [Citrus sinensis]
8 Hb_000146_050 0.0933973391 - - PREDICTED: protein unc-50 homolog isoform X2 [Gossypium raimondii]
9 Hb_004310_020 0.0954035331 - - PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Jatropha curcas]
10 Hb_158062_010 0.0957086954 - - PREDICTED: uncharacterized protein LOC105634413 [Jatropha curcas]
11 Hb_000603_150 0.0965335454 - - PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Jatropha curcas]
12 Hb_000453_160 0.0965832177 - - vacuolar protein sorting 26, vps26, putative [Ricinus communis]
13 Hb_000720_040 0.1034248901 - - PREDICTED: replication factor C subunit 2 [Jatropha curcas]
14 Hb_003185_010 0.1037074529 - - PREDICTED: V-type proton ATPase subunit c''1 [Jatropha curcas]
15 Hb_003528_010 0.1042457752 transcription factor TF Family: MYB PREDICTED: myb-related protein 3R-1 [Jatropha curcas]
16 Hb_004473_040 0.1053460931 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000205_300 0.1065821946 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
18 Hb_003549_150 0.1067599455 - - clathrin coat adaptor ap3 medium chain, putative [Ricinus communis]
19 Hb_000331_090 0.1083944485 - - hypothetical protein PRUPE_ppa010923mg [Prunus persica]
20 Hb_000948_230 0.1086665932 - - WD-repeat protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000025_630 Hb_000025_630 Hb_172632_120 Hb_172632_120 Hb_000025_630--Hb_172632_120 Hb_012322_020 Hb_012322_020 Hb_000025_630--Hb_012322_020 Hb_000025_180 Hb_000025_180 Hb_000025_630--Hb_000025_180 Hb_002235_210 Hb_002235_210 Hb_000025_630--Hb_002235_210 Hb_001699_100 Hb_001699_100 Hb_000025_630--Hb_001699_100 Hb_007441_190 Hb_007441_190 Hb_000025_630--Hb_007441_190 Hb_172632_120--Hb_000025_180 Hb_001408_040 Hb_001408_040 Hb_172632_120--Hb_001408_040 Hb_000603_150 Hb_000603_150 Hb_172632_120--Hb_000603_150 Hb_001959_110 Hb_001959_110 Hb_172632_120--Hb_001959_110 Hb_001142_030 Hb_001142_030 Hb_172632_120--Hb_001142_030 Hb_000146_050 Hb_000146_050 Hb_012322_020--Hb_000146_050 Hb_000009_400 Hb_000009_400 Hb_012322_020--Hb_000009_400 Hb_001051_080 Hb_001051_080 Hb_012322_020--Hb_001051_080 Hb_001635_160 Hb_001635_160 Hb_012322_020--Hb_001635_160 Hb_012322_020--Hb_172632_120 Hb_012322_020--Hb_002235_210 Hb_000260_330 Hb_000260_330 Hb_000025_180--Hb_000260_330 Hb_003750_050 Hb_003750_050 Hb_000025_180--Hb_003750_050 Hb_013738_020 Hb_013738_020 Hb_000025_180--Hb_013738_020 Hb_000025_180--Hb_000603_150 Hb_002811_180 Hb_002811_180 Hb_000025_180--Hb_002811_180 Hb_004631_180 Hb_004631_180 Hb_002235_210--Hb_004631_180 Hb_002235_210--Hb_001051_080 Hb_003893_030 Hb_003893_030 Hb_002235_210--Hb_003893_030 Hb_006916_040 Hb_006916_040 Hb_002235_210--Hb_006916_040 Hb_004310_020 Hb_004310_020 Hb_002235_210--Hb_004310_020 Hb_000453_160 Hb_000453_160 Hb_001699_100--Hb_000453_160 Hb_002053_140 Hb_002053_140 Hb_001699_100--Hb_002053_140 Hb_000300_630 Hb_000300_630 Hb_001699_100--Hb_000300_630 Hb_012796_020 Hb_012796_020 Hb_001699_100--Hb_012796_020 Hb_001699_100--Hb_007441_190 Hb_002863_050 Hb_002863_050 Hb_007441_190--Hb_002863_050 Hb_000580_180 Hb_000580_180 Hb_007441_190--Hb_000580_180 Hb_007441_190--Hb_172632_120 Hb_011344_210 Hb_011344_210 Hb_007441_190--Hb_011344_210 Hb_000948_230 Hb_000948_230 Hb_007441_190--Hb_000948_230 Hb_156635_010 Hb_156635_010 Hb_007441_190--Hb_156635_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.6487 22.2862 29.4862 58.1924 28.7957 35.5169
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.8606 37.4662 27.1804 25.6903 9.20475

CAGE analysis