Hb_001635_160

Information

Type -
Description -
Location Contig1635: 159336-166481
Sequence    

Annotation

kegg
ID rcu:RCOM_1485750
description hypothetical protein
nr
ID KDP40811.1
description hypothetical protein JCGZ_24810 [Jatropha curcas]
swissprot
ID A0MFS9
description Anoctamin-like protein At1g73020 OS=Arabidopsis thaliana GN=At1g73020 PE=1 SV=1
trembl
ID A0A067KX90
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24810 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14951: 159241-160471 , PASA_asmbl_14952: 166589-166740
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001635_160 0.0 - - hypothetical protein JCGZ_24810 [Jatropha curcas]
2 Hb_005460_050 0.0563335968 - - COR413-PM2, putative [Ricinus communis]
3 Hb_008120_030 0.0570080965 - - PREDICTED: uncharacterized protein LOC101216675 [Cucumis sativus]
4 Hb_000035_110 0.0610885774 - - PREDICTED: transcription initiation factor TFIID subunit 5 [Jatropha curcas]
5 Hb_105328_020 0.0620158195 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
6 Hb_001377_310 0.0652577543 transcription factor TF Family: Coactivator p15 PREDICTED: uncharacterized protein LOC105642839 [Jatropha curcas]
7 Hb_002398_030 0.0681680191 - - amino acid binding protein, putative [Ricinus communis]
8 Hb_014361_070 0.0691535331 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
9 Hb_001922_150 0.0693121813 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
10 Hb_028512_020 0.0709183973 - - PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
11 Hb_000345_380 0.0712682041 - - PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Jatropha curcas]
12 Hb_000617_100 0.0714161737 - - PREDICTED: uncharacterized protein LOC105647493 [Jatropha curcas]
13 Hb_000170_090 0.0716075144 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
14 Hb_011609_140 0.0718800692 - - hypothetical protein JCGZ_12974 [Jatropha curcas]
15 Hb_019280_030 0.0725705837 - - -
16 Hb_012322_020 0.073336992 - - -
17 Hb_000484_030 0.0755151778 - - PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Jatropha curcas]
18 Hb_000933_010 0.0756350805 - - -
19 Hb_001051_080 0.0757428828 - - hypothetical protein EUGRSUZ_B02508 [Eucalyptus grandis]
20 Hb_004109_230 0.0759827961 - - heat shock protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001635_160 Hb_001635_160 Hb_005460_050 Hb_005460_050 Hb_001635_160--Hb_005460_050 Hb_008120_030 Hb_008120_030 Hb_001635_160--Hb_008120_030 Hb_000035_110 Hb_000035_110 Hb_001635_160--Hb_000035_110 Hb_105328_020 Hb_105328_020 Hb_001635_160--Hb_105328_020 Hb_001377_310 Hb_001377_310 Hb_001635_160--Hb_001377_310 Hb_002398_030 Hb_002398_030 Hb_001635_160--Hb_002398_030 Hb_005460_050--Hb_001377_310 Hb_032990_010 Hb_032990_010 Hb_005460_050--Hb_032990_010 Hb_000933_010 Hb_000933_010 Hb_005460_050--Hb_000933_010 Hb_003897_040 Hb_003897_040 Hb_005460_050--Hb_003897_040 Hb_007062_040 Hb_007062_040 Hb_005460_050--Hb_007062_040 Hb_008120_030--Hb_002398_030 Hb_011310_210 Hb_011310_210 Hb_008120_030--Hb_011310_210 Hb_000777_050 Hb_000777_050 Hb_008120_030--Hb_000777_050 Hb_003549_090 Hb_003549_090 Hb_008120_030--Hb_003549_090 Hb_000345_380 Hb_000345_380 Hb_008120_030--Hb_000345_380 Hb_000035_110--Hb_001377_310 Hb_000005_220 Hb_000005_220 Hb_000035_110--Hb_000005_220 Hb_004020_040 Hb_004020_040 Hb_000035_110--Hb_004020_040 Hb_000035_110--Hb_005460_050 Hb_010150_020 Hb_010150_020 Hb_000035_110--Hb_010150_020 Hb_000170_090 Hb_000170_090 Hb_105328_020--Hb_000170_090 Hb_105328_020--Hb_000345_380 Hb_011037_030 Hb_011037_030 Hb_105328_020--Hb_011037_030 Hb_006588_170 Hb_006588_170 Hb_105328_020--Hb_006588_170 Hb_013399_020 Hb_013399_020 Hb_105328_020--Hb_013399_020 Hb_000156_010 Hb_000156_010 Hb_105328_020--Hb_000156_010 Hb_001377_310--Hb_000170_090 Hb_000373_080 Hb_000373_080 Hb_001377_310--Hb_000373_080 Hb_003861_050 Hb_003861_050 Hb_001377_310--Hb_003861_050 Hb_004586_060 Hb_004586_060 Hb_001377_310--Hb_004586_060 Hb_000445_050 Hb_000445_050 Hb_002398_030--Hb_000445_050 Hb_002398_030--Hb_003549_090 Hb_058999_030 Hb_058999_030 Hb_002398_030--Hb_058999_030 Hb_002398_030--Hb_000035_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.07531 2.48724 2.51175 3.49582 2.43166 3.75089
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.12504 1.99725 1.91435 2.24579 2.19974

CAGE analysis