Hb_088163_010

Information

Type -
Description -
Location Contig88163: 519-1054
Sequence    

Annotation

kegg
ID rcu:RCOM_1582190
description catalytic, putative
nr
ID XP_012090183.1
description PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
swissprot
ID Q84WV9
description Glutaminyl-peptide cyclotransferase OS=Arabidopsis thaliana GN=QCT PE=1 SV=1
trembl
ID A0A067JQH7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26056 PE=4 SV=1
Gene Ontology
ID GO:0005886
description glutaminyl-peptide cyclotransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_088163_010 0.0 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
2 Hb_075764_010 0.0995900904 - - PREDICTED: PRA1 family protein A1-like [Jatropha curcas]
3 Hb_001767_130 0.1276044841 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
4 Hb_000230_180 0.1309466514 - - prolyl 4-hydroxylase alpha subunit, putative [Ricinus communis]
5 Hb_099878_050 0.1348081743 - - PREDICTED: uncharacterized protein LOC105123495 isoform X2 [Populus euphratica]
6 Hb_090158_010 0.1399176827 - - hypothetical protein RCOM_1968400 [Ricinus communis]
7 Hb_165402_010 0.1414336346 - - PREDICTED: cullin-1 isoform X3 [Nicotiana sylvestris]
8 Hb_000053_030 0.1416172241 - - hypothetical protein CISIN_1g0010393mg, partial [Citrus sinensis]
9 Hb_002611_020 0.1442268635 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [Populus euphratica]
10 Hb_002122_010 0.1493020266 - - -
11 Hb_131035_010 0.1510560014 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_002148_020 0.1523611359 - - aldo-keto reductase, putative [Ricinus communis]
13 Hb_001124_110 0.1525897096 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]
14 Hb_004040_030 0.1528266768 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
15 Hb_004466_060 0.1536426145 - - hypothetical protein POPTR_0009s12110g [Populus trichocarpa]
16 Hb_013358_090 0.1549515974 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
17 Hb_000720_080 0.1571047716 - - PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Jatropha curcas]
18 Hb_000696_010 0.1571852004 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
19 Hb_000331_370 0.1602239988 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
20 Hb_000035_200 0.1618938566 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]

Gene co-expression network

sample Hb_088163_010 Hb_088163_010 Hb_075764_010 Hb_075764_010 Hb_088163_010--Hb_075764_010 Hb_001767_130 Hb_001767_130 Hb_088163_010--Hb_001767_130 Hb_000230_180 Hb_000230_180 Hb_088163_010--Hb_000230_180 Hb_099878_050 Hb_099878_050 Hb_088163_010--Hb_099878_050 Hb_090158_010 Hb_090158_010 Hb_088163_010--Hb_090158_010 Hb_165402_010 Hb_165402_010 Hb_088163_010--Hb_165402_010 Hb_075764_010--Hb_000230_180 Hb_075764_010--Hb_099878_050 Hb_002611_020 Hb_002611_020 Hb_075764_010--Hb_002611_020 Hb_075764_010--Hb_165402_010 Hb_002122_010 Hb_002122_010 Hb_075764_010--Hb_002122_010 Hb_002102_030 Hb_002102_030 Hb_001767_130--Hb_002102_030 Hb_000035_200 Hb_000035_200 Hb_001767_130--Hb_000035_200 Hb_131035_010 Hb_131035_010 Hb_001767_130--Hb_131035_010 Hb_002148_020 Hb_002148_020 Hb_001767_130--Hb_002148_020 Hb_003925_020 Hb_003925_020 Hb_001767_130--Hb_003925_020 Hb_000230_180--Hb_002611_020 Hb_005170_010 Hb_005170_010 Hb_000230_180--Hb_005170_010 Hb_086639_080 Hb_086639_080 Hb_000230_180--Hb_086639_080 Hb_002498_050 Hb_002498_050 Hb_000230_180--Hb_002498_050 Hb_000696_010 Hb_000696_010 Hb_000230_180--Hb_000696_010 Hb_106415_010 Hb_106415_010 Hb_099878_050--Hb_106415_010 Hb_012506_010 Hb_012506_010 Hb_099878_050--Hb_012506_010 Hb_013358_090 Hb_013358_090 Hb_099878_050--Hb_013358_090 Hb_133724_010 Hb_133724_010 Hb_099878_050--Hb_133724_010 Hb_002687_080 Hb_002687_080 Hb_099878_050--Hb_002687_080 Hb_090158_010--Hb_075764_010 Hb_090158_010--Hb_099878_050 Hb_085972_010 Hb_085972_010 Hb_090158_010--Hb_085972_010 Hb_146675_010 Hb_146675_010 Hb_090158_010--Hb_146675_010 Hb_129672_010 Hb_129672_010 Hb_090158_010--Hb_129672_010 Hb_181441_010 Hb_181441_010 Hb_165402_010--Hb_181441_010 Hb_106688_010 Hb_106688_010 Hb_165402_010--Hb_106688_010 Hb_165402_010--Hb_000230_180 Hb_077573_010 Hb_077573_010 Hb_165402_010--Hb_077573_010 Hb_165402_010--Hb_002611_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.4705 21.7649 30.9291 165.235 36.7017 78.9853
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.3208 27.89 21.2365 57.8688 12.1356

CAGE analysis