Hb_146675_010

Information

Type -
Description -
Location Contig146675: 1810-2251
Sequence    

Annotation

kegg
ID mdm:103444821
description peroxisomal nicotinamide adenine dinucleotide carrier-like
nr
ID XP_008381994.1
description PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier-like isoform X2 [Malus domestica]
swissprot
ID O04200
description Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1
trembl
ID M0UDE5
description Uncharacterized protein OS=Hordeum vulgare var. distichum PE=3 SV=1
Gene Ontology
ID GO:0005774
description peroxisomal nicotinamide adenine dinucleotide carrier

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146675_010 0.0 - - PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier-like isoform X2 [Malus domestica]
2 Hb_099878_050 0.1376039955 - - PREDICTED: uncharacterized protein LOC105123495 isoform X2 [Populus euphratica]
3 Hb_002192_090 0.1383461644 - - hypothetical protein AMTR_s00029p00055000 [Amborella trichopoda]
4 Hb_090158_010 0.1447256591 - - hypothetical protein RCOM_1968400 [Ricinus communis]
5 Hb_133724_010 0.1478426481 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000317_140 0.1573760244 - - hypothetical protein CISIN_1g0019781mg, partial [Citrus sinensis]
7 Hb_002388_010 0.160527443 - - -
8 Hb_005686_120 0.1613067257 - - -
9 Hb_000481_050 0.1630252616 - - PREDICTED: uncharacterized protein LOC105636546 [Jatropha curcas]
10 Hb_106415_010 0.1645007677 - - PREDICTED: snRNA-activating protein complex subunit isoform X1 [Jatropha curcas]
11 Hb_130613_010 0.1683545163 - - Charged multivesicular body protein 2a, putative [Ricinus communis]
12 Hb_075764_010 0.1707823695 - - PREDICTED: PRA1 family protein A1-like [Jatropha curcas]
13 Hb_003371_170 0.1727701556 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000015_070 0.1730521483 - - hypothetical protein POPTR_0001s22690g [Populus trichocarpa]
15 Hb_085972_010 0.1735508889 transcription factor TF Family: NAC NAC transcription factor 066 [Jatropha curcas]
16 Hb_066913_010 0.1782290935 - - hypothetical protein POPTR_0006s03150g [Populus trichocarpa]
17 Hb_001135_140 0.1785145463 - - PREDICTED: serine/threonine-protein kinase PBS1-like [Malus domestica]
18 Hb_145629_010 0.1801910659 - - -
19 Hb_000111_030 0.1836478765 - - PREDICTED: uncharacterized protein LOC104094030 [Nicotiana tomentosiformis]
20 Hb_106688_010 0.1837539009 - - aspartyl-tRNA synthetase, putative [Ricinus communis]

Gene co-expression network

sample Hb_146675_010 Hb_146675_010 Hb_099878_050 Hb_099878_050 Hb_146675_010--Hb_099878_050 Hb_002192_090 Hb_002192_090 Hb_146675_010--Hb_002192_090 Hb_090158_010 Hb_090158_010 Hb_146675_010--Hb_090158_010 Hb_133724_010 Hb_133724_010 Hb_146675_010--Hb_133724_010 Hb_000317_140 Hb_000317_140 Hb_146675_010--Hb_000317_140 Hb_002388_010 Hb_002388_010 Hb_146675_010--Hb_002388_010 Hb_106415_010 Hb_106415_010 Hb_099878_050--Hb_106415_010 Hb_075764_010 Hb_075764_010 Hb_099878_050--Hb_075764_010 Hb_012506_010 Hb_012506_010 Hb_099878_050--Hb_012506_010 Hb_013358_090 Hb_013358_090 Hb_099878_050--Hb_013358_090 Hb_099878_050--Hb_133724_010 Hb_002687_080 Hb_002687_080 Hb_099878_050--Hb_002687_080 Hb_002192_090--Hb_133724_010 Hb_001518_070 Hb_001518_070 Hb_002192_090--Hb_001518_070 Hb_002192_090--Hb_002388_010 Hb_001747_030 Hb_001747_030 Hb_002192_090--Hb_001747_030 Hb_000053_030 Hb_000053_030 Hb_002192_090--Hb_000053_030 Hb_002192_090--Hb_099878_050 Hb_090158_010--Hb_075764_010 Hb_090158_010--Hb_099878_050 Hb_085972_010 Hb_085972_010 Hb_090158_010--Hb_085972_010 Hb_088163_010 Hb_088163_010 Hb_090158_010--Hb_088163_010 Hb_129672_010 Hb_129672_010 Hb_090158_010--Hb_129672_010 Hb_133724_010--Hb_002388_010 Hb_001829_040 Hb_001829_040 Hb_133724_010--Hb_001829_040 Hb_130613_010 Hb_130613_010 Hb_133724_010--Hb_130613_010 Hb_133724_010--Hb_001518_070 Hb_002168_010 Hb_002168_010 Hb_000317_140--Hb_002168_010 Hb_000015_070 Hb_000015_070 Hb_000317_140--Hb_000015_070 Hb_004709_020 Hb_004709_020 Hb_000317_140--Hb_004709_020 Hb_004466_060 Hb_004466_060 Hb_000317_140--Hb_004466_060 Hb_150023_010 Hb_150023_010 Hb_000317_140--Hb_150023_010 Hb_000111_030 Hb_000111_030 Hb_002388_010--Hb_000111_030 Hb_066913_010 Hb_066913_010 Hb_002388_010--Hb_066913_010 Hb_073799_010 Hb_073799_010 Hb_002388_010--Hb_073799_010 Hb_003551_010 Hb_003551_010 Hb_002388_010--Hb_003551_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.3554 62.9128 47.422 199.223 20.2413 176.114
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
61.5195 56.3737 23.628 49.1454 10.9346

CAGE analysis