Hb_126711_010

Information

Type -
Description -
Location Contig126711: 9073-9594
Sequence    

Annotation

kegg
ID pop:POPTR_0003s16350g
description POPTRDRAFT_712551; hypothetical protein
nr
ID AIY25011.1
description JAZ10 [Hevea brasiliensis]
swissprot
ID Q93ZM9
description Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1
trembl
ID A0A0B4RUX7
description JAZ10 OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0006950
description protein tify 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126711_010 0.0 - - JAZ10 [Hevea brasiliensis]
2 Hb_123301_010 0.1997982052 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001329_030 0.2022824445 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001369_500 0.2155684266 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
5 Hb_000062_200 0.2170064968 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
6 Hb_000313_280 0.2220446756 - - hypothetical protein PRUPE_ppa014856mg, partial [Prunus persica]
7 Hb_000649_340 0.2244831829 - - PREDICTED: dynein light chain 1, cytoplasmic [Jatropha curcas]
8 Hb_002490_030 0.225508967 - - conserved hypothetical protein [Ricinus communis]
9 Hb_103942_030 0.2291253011 - - protein with unknown function [Ricinus communis]
10 Hb_124951_020 0.2311143232 - - -
11 Hb_001894_180 0.2316584592 - - galactinol synthase [Manihot esculenta]
12 Hb_011918_010 0.233878948 - - hypothetical protein glysoja_041948 [Glycine soja]
13 Hb_000302_110 0.2355621661 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_002894_070 0.236940767 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein B [Jatropha curcas]
15 Hb_186647_010 0.2406884862 - - -
16 Hb_002026_160 0.2414392039 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-like [Jatropha curcas]
17 Hb_007163_050 0.2417185007 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
18 Hb_003226_130 0.2433775153 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]
19 Hb_034299_070 0.2457250433 - - actin binding protein, putative [Ricinus communis]
20 Hb_000028_260 0.2464783375 - - hypothetical protein glysoja_041948 [Glycine soja]

Gene co-expression network

sample Hb_126711_010 Hb_126711_010 Hb_123301_010 Hb_123301_010 Hb_126711_010--Hb_123301_010 Hb_001329_030 Hb_001329_030 Hb_126711_010--Hb_001329_030 Hb_001369_500 Hb_001369_500 Hb_126711_010--Hb_001369_500 Hb_000062_200 Hb_000062_200 Hb_126711_010--Hb_000062_200 Hb_000313_280 Hb_000313_280 Hb_126711_010--Hb_000313_280 Hb_000649_340 Hb_000649_340 Hb_126711_010--Hb_000649_340 Hb_123301_010--Hb_000649_340 Hb_002686_260 Hb_002686_260 Hb_123301_010--Hb_002686_260 Hb_003226_130 Hb_003226_130 Hb_123301_010--Hb_003226_130 Hb_002490_030 Hb_002490_030 Hb_123301_010--Hb_002490_030 Hb_123301_010--Hb_000313_280 Hb_001894_180 Hb_001894_180 Hb_001329_030--Hb_001894_180 Hb_009010_040 Hb_009010_040 Hb_001329_030--Hb_009010_040 Hb_010377_020 Hb_010377_020 Hb_001329_030--Hb_010377_020 Hb_168319_020 Hb_168319_020 Hb_001329_030--Hb_168319_020 Hb_001638_180 Hb_001638_180 Hb_001329_030--Hb_001638_180 Hb_004308_020 Hb_004308_020 Hb_001369_500--Hb_004308_020 Hb_001810_040 Hb_001810_040 Hb_001369_500--Hb_001810_040 Hb_002320_050 Hb_002320_050 Hb_001369_500--Hb_002320_050 Hb_153774_010 Hb_153774_010 Hb_001369_500--Hb_153774_010 Hb_000358_130 Hb_000358_130 Hb_001369_500--Hb_000358_130 Hb_004109_210 Hb_004109_210 Hb_000062_200--Hb_004109_210 Hb_000062_200--Hb_001369_500 Hb_007382_130 Hb_007382_130 Hb_000062_200--Hb_007382_130 Hb_002759_270 Hb_002759_270 Hb_000062_200--Hb_002759_270 Hb_000164_010 Hb_000164_010 Hb_000062_200--Hb_000164_010 Hb_002894_070 Hb_002894_070 Hb_000313_280--Hb_002894_070 Hb_002122_060 Hb_002122_060 Hb_000313_280--Hb_002122_060 Hb_000015_140 Hb_000015_140 Hb_000313_280--Hb_000015_140 Hb_000616_100 Hb_000616_100 Hb_000313_280--Hb_000616_100 Hb_000450_170 Hb_000450_170 Hb_000313_280--Hb_000450_170 Hb_000313_280--Hb_003226_130 Hb_128473_010 Hb_128473_010 Hb_000649_340--Hb_128473_010 Hb_000776_060 Hb_000776_060 Hb_000649_340--Hb_000776_060 Hb_001195_410 Hb_001195_410 Hb_000649_340--Hb_001195_410 Hb_000028_260 Hb_000028_260 Hb_000649_340--Hb_000028_260 Hb_000046_270 Hb_000046_270 Hb_000649_340--Hb_000046_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.0524 51.2934 46.5659 257.55 5.11278 2.63888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.2232 8.55006 37.7331 17.3792 0.455233

CAGE analysis