Hb_128473_010

Information

Type -
Description -
Location Contig128473: 22-1417
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128473_010 0.0 - - -
2 Hb_000261_170 0.1612420496 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
3 Hb_073799_010 0.1758980905 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000649_340 0.1841094532 - - PREDICTED: dynein light chain 1, cytoplasmic [Jatropha curcas]
5 Hb_000311_040 0.18958802 - - PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
6 Hb_008185_020 0.1937400042 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
7 Hb_000483_400 0.2006361045 - - PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Jatropha curcas]
8 Hb_001195_410 0.2006781665 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
9 Hb_123301_010 0.2102988039 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004785_050 0.2158104344 - - PREDICTED: serine decarboxylase [Jatropha curcas]
11 Hb_004117_330 0.2160801008 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005144_170 0.2181592397 - - PREDICTED: shugoshin-1-like isoform X2 [Jatropha curcas]
13 Hb_030992_010 0.2185411538 - - acetylornithine aminotransferase, putative [Ricinus communis]
14 Hb_002243_050 0.2189109181 - - PREDICTED: ion channel DMI1-like isoform X2 [Jatropha curcas]
15 Hb_000816_190 0.2202741936 - - conserved hypothetical protein [Ricinus communis]
16 Hb_011287_040 0.2240777297 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
17 Hb_011942_010 0.2241503437 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001247_030 0.2255091248 - - -
19 Hb_182713_020 0.2287542989 - - PREDICTED: vesicle-associated membrane protein 727 [Setaria italica]
20 Hb_000046_270 0.2300828539 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_128473_010 Hb_128473_010 Hb_000261_170 Hb_000261_170 Hb_128473_010--Hb_000261_170 Hb_073799_010 Hb_073799_010 Hb_128473_010--Hb_073799_010 Hb_000649_340 Hb_000649_340 Hb_128473_010--Hb_000649_340 Hb_000311_040 Hb_000311_040 Hb_128473_010--Hb_000311_040 Hb_008185_020 Hb_008185_020 Hb_128473_010--Hb_008185_020 Hb_000483_400 Hb_000483_400 Hb_128473_010--Hb_000483_400 Hb_001355_120 Hb_001355_120 Hb_000261_170--Hb_001355_120 Hb_000261_170--Hb_000649_340 Hb_001828_100 Hb_001828_100 Hb_000261_170--Hb_001828_100 Hb_004158_100 Hb_004158_100 Hb_000261_170--Hb_004158_100 Hb_004785_050 Hb_004785_050 Hb_000261_170--Hb_004785_050 Hb_002388_010 Hb_002388_010 Hb_073799_010--Hb_002388_010 Hb_182713_020 Hb_182713_020 Hb_073799_010--Hb_182713_020 Hb_011942_010 Hb_011942_010 Hb_073799_010--Hb_011942_010 Hb_013394_100 Hb_013394_100 Hb_073799_010--Hb_013394_100 Hb_011287_040 Hb_011287_040 Hb_073799_010--Hb_011287_040 Hb_123301_010 Hb_123301_010 Hb_000649_340--Hb_123301_010 Hb_000776_060 Hb_000776_060 Hb_000649_340--Hb_000776_060 Hb_001195_410 Hb_001195_410 Hb_000649_340--Hb_001195_410 Hb_000028_260 Hb_000028_260 Hb_000649_340--Hb_000028_260 Hb_000046_270 Hb_000046_270 Hb_000649_340--Hb_000046_270 Hb_000311_040--Hb_001195_410 Hb_034507_040 Hb_034507_040 Hb_000311_040--Hb_034507_040 Hb_000816_190 Hb_000816_190 Hb_000311_040--Hb_000816_190 Hb_000291_160 Hb_000291_160 Hb_000311_040--Hb_000291_160 Hb_011918_010 Hb_011918_010 Hb_000311_040--Hb_011918_010 Hb_000311_040--Hb_008185_020 Hb_184541_010 Hb_184541_010 Hb_008185_020--Hb_184541_010 Hb_053709_040 Hb_053709_040 Hb_008185_020--Hb_053709_040 Hb_001247_030 Hb_001247_030 Hb_008185_020--Hb_001247_030 Hb_004125_070 Hb_004125_070 Hb_008185_020--Hb_004125_070 Hb_008185_020--Hb_011918_010 Hb_030992_010 Hb_030992_010 Hb_008185_020--Hb_030992_010 Hb_000796_020 Hb_000796_020 Hb_000483_400--Hb_000796_020 Hb_000240_120 Hb_000240_120 Hb_000483_400--Hb_000240_120 Hb_175933_010 Hb_175933_010 Hb_000483_400--Hb_175933_010 Hb_004453_070 Hb_004453_070 Hb_000483_400--Hb_004453_070 Hb_000683_100 Hb_000683_100 Hb_000483_400--Hb_000683_100 Hb_000217_020 Hb_000217_020 Hb_000483_400--Hb_000217_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.39057 3.46066 8.45302 34.975 1.37627 3.65516
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.48528 9.03543 0.66407 1.87808 0.362635

CAGE analysis