Hb_004158_100

Information

Type -
Description -
Location Contig4158: 190153-199926
Sequence    

Annotation

kegg
ID vvi:100256751
description type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
nr
ID XP_012074876.1
description PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
swissprot
ID Q9LR47
description Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2
trembl
ID A0A067KHH9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09025 PE=4 SV=1
Gene Ontology
ID GO:0046856
description type i inositol -trisphosphate 5-phosphatase cvp2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41131: 196683-197168 , PASA_asmbl_41132: 198132-200316
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004158_100 0.0 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
2 Hb_001355_120 0.2088272289 - - cytochrome P450, putative [Ricinus communis]
3 Hb_000603_010 0.2100981297 - - PREDICTED: transmembrane protein 87A-like [Nelumbo nucifera]
4 Hb_118094_010 0.2111611175 - - hypothetical protein POPTR_0011s06595g [Populus trichocarpa]
5 Hb_000261_170 0.238162646 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
6 Hb_001828_100 0.2389125352 - - PREDICTED: death-associated protein kinase dapk-1 [Jatropha curcas]
7 Hb_001584_030 0.2697000712 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Nelumbo nucifera]
8 Hb_015941_050 0.2704442537 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001563_020 0.271931975 transcription factor TF Family: TRAF aberrant large forked product, putative [Ricinus communis]
10 Hb_003996_030 0.2792197713 - - -
11 Hb_002205_170 0.2861207276 - - PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]
12 Hb_000318_080 0.2882938607 - - PREDICTED: la-related protein 6C [Jatropha curcas]
13 Hb_133661_010 0.2917291158 - - hypothetical protein JCGZ_11734 [Jatropha curcas]
14 Hb_000243_370 0.2962978362 - - hypothetical protein VITISV_010022 [Vitis vinifera]
15 Hb_178968_040 0.2972197254 - - conserved hypothetical protein [Ricinus communis]
16 Hb_005045_050 0.3003087585 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 3 [Jatropha curcas]
17 Hb_014720_100 0.3021888448 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
18 Hb_000483_400 0.3042318175 - - PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Jatropha curcas]
19 Hb_000742_030 0.3069207784 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
20 Hb_001832_150 0.3075311181 - - PREDICTED: uncharacterized protein LOC105637882 [Jatropha curcas]

Gene co-expression network

sample Hb_004158_100 Hb_004158_100 Hb_001355_120 Hb_001355_120 Hb_004158_100--Hb_001355_120 Hb_000603_010 Hb_000603_010 Hb_004158_100--Hb_000603_010 Hb_118094_010 Hb_118094_010 Hb_004158_100--Hb_118094_010 Hb_000261_170 Hb_000261_170 Hb_004158_100--Hb_000261_170 Hb_001828_100 Hb_001828_100 Hb_004158_100--Hb_001828_100 Hb_001584_030 Hb_001584_030 Hb_004158_100--Hb_001584_030 Hb_001355_120--Hb_000603_010 Hb_001355_120--Hb_000261_170 Hb_001355_120--Hb_001584_030 Hb_000649_340 Hb_000649_340 Hb_001355_120--Hb_000649_340 Hb_133661_010 Hb_133661_010 Hb_001355_120--Hb_133661_010 Hb_000603_010--Hb_001584_030 Hb_002874_020 Hb_002874_020 Hb_000603_010--Hb_002874_020 Hb_001563_020 Hb_001563_020 Hb_000603_010--Hb_001563_020 Hb_000603_010--Hb_133661_010 Hb_005363_010 Hb_005363_010 Hb_118094_010--Hb_005363_010 Hb_001507_030 Hb_001507_030 Hb_118094_010--Hb_001507_030 Hb_001221_520 Hb_001221_520 Hb_118094_010--Hb_001221_520 Hb_000318_080 Hb_000318_080 Hb_118094_010--Hb_000318_080 Hb_015586_010 Hb_015586_010 Hb_118094_010--Hb_015586_010 Hb_128473_010 Hb_128473_010 Hb_000261_170--Hb_128473_010 Hb_000261_170--Hb_000649_340 Hb_000261_170--Hb_001828_100 Hb_004785_050 Hb_004785_050 Hb_000261_170--Hb_004785_050 Hb_118228_010 Hb_118228_010 Hb_001828_100--Hb_118228_010 Hb_000109_230 Hb_000109_230 Hb_001828_100--Hb_000109_230 Hb_001828_100--Hb_128473_010 Hb_000032_050 Hb_000032_050 Hb_001828_100--Hb_000032_050 Hb_002157_090 Hb_002157_090 Hb_001584_030--Hb_002157_090 Hb_001584_030--Hb_001563_020 Hb_004241_010 Hb_004241_010 Hb_001584_030--Hb_004241_010 Hb_001584_030--Hb_133661_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0129682 0.107415 0.030521 0.694794 0 0.0257764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.177175 0.325248 0 0.00926728 0.048699

CAGE analysis