Hb_001355_120

Information

Type -
Description -
Location Contig1355: 96610-100366
Sequence    

Annotation

kegg
ID rcu:RCOM_0534840
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID XP_002521537.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9FH76
description Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana GN=CYP707A3 PE=1 SV=1
trembl
ID B9S6B8
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0534840 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001355_120 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000603_010 0.1897189957 - - PREDICTED: transmembrane protein 87A-like [Nelumbo nucifera]
3 Hb_004158_100 0.2088272289 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
4 Hb_000261_170 0.2184783654 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
5 Hb_001584_030 0.2394834301 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Nelumbo nucifera]
6 Hb_000649_340 0.2534916214 - - PREDICTED: dynein light chain 1, cytoplasmic [Jatropha curcas]
7 Hb_133661_010 0.255882006 - - hypothetical protein JCGZ_11734 [Jatropha curcas]
8 Hb_003226_130 0.2611474923 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]
9 Hb_002874_020 0.2618299876 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105637459 isoform X1 [Jatropha curcas]
10 Hb_001828_100 0.2692950254 - - PREDICTED: death-associated protein kinase dapk-1 [Jatropha curcas]
11 Hb_128473_010 0.2751707135 - - -
12 Hb_123301_010 0.2768539518 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000352_240 0.28263577 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
14 Hb_000028_260 0.2883660812 - - hypothetical protein glysoja_041948 [Glycine soja]
15 Hb_002243_050 0.2898125338 - - PREDICTED: ion channel DMI1-like isoform X2 [Jatropha curcas]
16 Hb_004785_050 0.2908941937 - - PREDICTED: serine decarboxylase [Jatropha curcas]
17 Hb_004308_020 0.2940393826 - - hypothetical protein POPTR_0005s15590g [Populus trichocarpa]
18 Hb_000046_270 0.2994238498 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]
19 Hb_001514_260 0.3077068783 - - -
20 Hb_118094_010 0.3087417876 - - hypothetical protein POPTR_0011s06595g [Populus trichocarpa]

Gene co-expression network

sample Hb_001355_120 Hb_001355_120 Hb_000603_010 Hb_000603_010 Hb_001355_120--Hb_000603_010 Hb_004158_100 Hb_004158_100 Hb_001355_120--Hb_004158_100 Hb_000261_170 Hb_000261_170 Hb_001355_120--Hb_000261_170 Hb_001584_030 Hb_001584_030 Hb_001355_120--Hb_001584_030 Hb_000649_340 Hb_000649_340 Hb_001355_120--Hb_000649_340 Hb_133661_010 Hb_133661_010 Hb_001355_120--Hb_133661_010 Hb_000603_010--Hb_001584_030 Hb_000603_010--Hb_004158_100 Hb_002874_020 Hb_002874_020 Hb_000603_010--Hb_002874_020 Hb_001563_020 Hb_001563_020 Hb_000603_010--Hb_001563_020 Hb_000603_010--Hb_133661_010 Hb_118094_010 Hb_118094_010 Hb_004158_100--Hb_118094_010 Hb_004158_100--Hb_000261_170 Hb_001828_100 Hb_001828_100 Hb_004158_100--Hb_001828_100 Hb_004158_100--Hb_001584_030 Hb_128473_010 Hb_128473_010 Hb_000261_170--Hb_128473_010 Hb_000261_170--Hb_000649_340 Hb_000261_170--Hb_001828_100 Hb_004785_050 Hb_004785_050 Hb_000261_170--Hb_004785_050 Hb_002157_090 Hb_002157_090 Hb_001584_030--Hb_002157_090 Hb_001584_030--Hb_001563_020 Hb_004241_010 Hb_004241_010 Hb_001584_030--Hb_004241_010 Hb_001584_030--Hb_133661_010 Hb_123301_010 Hb_123301_010 Hb_000649_340--Hb_123301_010 Hb_000649_340--Hb_128473_010 Hb_000776_060 Hb_000776_060 Hb_000649_340--Hb_000776_060 Hb_001195_410 Hb_001195_410 Hb_000649_340--Hb_001195_410 Hb_000028_260 Hb_000028_260 Hb_000649_340--Hb_000028_260 Hb_000046_270 Hb_000046_270 Hb_000649_340--Hb_000046_270 Hb_133661_010--Hb_118094_010 Hb_133661_010--Hb_002157_090 Hb_133661_010--Hb_000261_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0274162 0.0210611 0.168647 0 0.0120763
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0313735 0.0493646 0 0 0

CAGE analysis