Hb_133661_010

Information

Type -
Description -
Location Contig133661: 6672-7282
Sequence    

Annotation

kegg
ID sly:101256756
description uncharacterized LOC101256756
nr
ID KDP31358.1
description hypothetical protein JCGZ_11734 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K8M1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11734 PE=4 SV=1
Gene Ontology
ID GO:0009507
description hypothetical protein JCGZ_11734

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133661_010 0.0 - - hypothetical protein JCGZ_11734 [Jatropha curcas]
2 Hb_001584_030 0.2383245776 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Nelumbo nucifera]
3 Hb_001355_120 0.255882006 - - cytochrome P450, putative [Ricinus communis]
4 Hb_118094_010 0.2655920003 - - hypothetical protein POPTR_0011s06595g [Populus trichocarpa]
5 Hb_000603_010 0.271280829 - - PREDICTED: transmembrane protein 87A-like [Nelumbo nucifera]
6 Hb_002157_090 0.272707228 - - hypothetical protein VITISV_041741 [Vitis vinifera]
7 Hb_000261_170 0.2763004577 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
8 Hb_000352_240 0.2808840805 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
9 Hb_004453_190 0.2820479874 - - -
10 Hb_005045_050 0.2857339845 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 3 [Jatropha curcas]
11 Hb_001269_250 0.2864333401 - - PREDICTED: factor of DNA methylation 1-like [Jatropha curcas]
12 Hb_004158_100 0.2917291158 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
13 Hb_005363_010 0.3014340153 - - hypothetical protein JCGZ_13835 [Jatropha curcas]
14 Hb_001016_020 0.3017136198 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001221_520 0.3035979513 - - conserved hypothetical protein [Ricinus communis]
16 Hb_023768_020 0.3045983217 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001269_290 0.3061712439 - - PREDICTED: uncharacterized protein LOC103438859 [Malus domestica]
18 Hb_118228_010 0.3108844481 - - PREDICTED: pirin-like protein [Jatropha curcas]
19 Hb_139569_010 0.3141707221 - - hypothetical protein JCGZ_24635 [Jatropha curcas]
20 Hb_000649_340 0.3168185755 - - PREDICTED: dynein light chain 1, cytoplasmic [Jatropha curcas]

Gene co-expression network

sample Hb_133661_010 Hb_133661_010 Hb_001584_030 Hb_001584_030 Hb_133661_010--Hb_001584_030 Hb_001355_120 Hb_001355_120 Hb_133661_010--Hb_001355_120 Hb_118094_010 Hb_118094_010 Hb_133661_010--Hb_118094_010 Hb_000603_010 Hb_000603_010 Hb_133661_010--Hb_000603_010 Hb_002157_090 Hb_002157_090 Hb_133661_010--Hb_002157_090 Hb_000261_170 Hb_000261_170 Hb_133661_010--Hb_000261_170 Hb_001584_030--Hb_002157_090 Hb_001584_030--Hb_000603_010 Hb_001563_020 Hb_001563_020 Hb_001584_030--Hb_001563_020 Hb_004241_010 Hb_004241_010 Hb_001584_030--Hb_004241_010 Hb_001584_030--Hb_001355_120 Hb_001355_120--Hb_000603_010 Hb_004158_100 Hb_004158_100 Hb_001355_120--Hb_004158_100 Hb_001355_120--Hb_000261_170 Hb_000649_340 Hb_000649_340 Hb_001355_120--Hb_000649_340 Hb_005363_010 Hb_005363_010 Hb_118094_010--Hb_005363_010 Hb_118094_010--Hb_004158_100 Hb_001507_030 Hb_001507_030 Hb_118094_010--Hb_001507_030 Hb_001221_520 Hb_001221_520 Hb_118094_010--Hb_001221_520 Hb_000318_080 Hb_000318_080 Hb_118094_010--Hb_000318_080 Hb_015586_010 Hb_015586_010 Hb_118094_010--Hb_015586_010 Hb_000603_010--Hb_004158_100 Hb_002874_020 Hb_002874_020 Hb_000603_010--Hb_002874_020 Hb_000603_010--Hb_001563_020 Hb_002157_090--Hb_001563_020 Hb_002157_090--Hb_004241_010 Hb_002157_090--Hb_015586_010 Hb_012379_010 Hb_012379_010 Hb_002157_090--Hb_012379_010 Hb_012008_010 Hb_012008_010 Hb_002157_090--Hb_012008_010 Hb_128473_010 Hb_128473_010 Hb_000261_170--Hb_128473_010 Hb_000261_170--Hb_000649_340 Hb_001828_100 Hb_001828_100 Hb_000261_170--Hb_001828_100 Hb_000261_170--Hb_004158_100 Hb_004785_050 Hb_004785_050 Hb_000261_170--Hb_004785_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.344683 0.105816 0.688176 0.0641978 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.160516 0.378246 0 0 0

CAGE analysis