Hb_005363_010

Information

Type -
Description -
Location Contig5363: 40905-41279
Sequence    

Annotation

kegg
ID rcu:RCOM_0505820
description hypothetical protein
nr
ID KDP32228.1
description hypothetical protein JCGZ_13835 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KB75
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13835 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005363_010 0.0 - - hypothetical protein JCGZ_13835 [Jatropha curcas]
2 Hb_001221_520 0.1622244743 - - conserved hypothetical protein [Ricinus communis]
3 Hb_118094_010 0.1700173205 - - hypothetical protein POPTR_0011s06595g [Populus trichocarpa]
4 Hb_001507_030 0.2040966055 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
5 Hb_001999_240 0.2089646758 - - PREDICTED: josephin-like protein [Populus euphratica]
6 Hb_003020_180 0.2140088677 - - PREDICTED: probable protein phosphatase 2C 24 [Jatropha curcas]
7 Hb_004899_310 0.225959661 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000307_120 0.2265960428 - - hypothetical protein B456_002G120900 [Gossypium raimondii]
9 Hb_173030_010 0.2288685782 - - hypothetical protein RCOM_1321060 [Ricinus communis]
10 Hb_003687_030 0.2439121999 - - protein phosphatase 2c, putative [Ricinus communis]
11 Hb_131684_010 0.2447541901 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005408_070 0.2498804813 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP4 [Jatropha curcas]
13 Hb_091889_020 0.2503915699 - - -
14 Hb_001511_190 0.2524949597 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
15 Hb_000504_110 0.256731506 - - F-box/LRR-repeat protein, putative [Ricinus communis]
16 Hb_005045_050 0.257227076 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 3 [Jatropha curcas]
17 Hb_002450_030 0.2583537318 - - ATPP2-A13, putative [Ricinus communis]
18 Hb_003442_100 0.2628963185 - - PREDICTED: uncharacterized protein LOC105650128 [Jatropha curcas]
19 Hb_000627_090 0.2648660953 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000059_300 0.265602826 - - caspase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005363_010 Hb_005363_010 Hb_001221_520 Hb_001221_520 Hb_005363_010--Hb_001221_520 Hb_118094_010 Hb_118094_010 Hb_005363_010--Hb_118094_010 Hb_001507_030 Hb_001507_030 Hb_005363_010--Hb_001507_030 Hb_001999_240 Hb_001999_240 Hb_005363_010--Hb_001999_240 Hb_003020_180 Hb_003020_180 Hb_005363_010--Hb_003020_180 Hb_004899_310 Hb_004899_310 Hb_005363_010--Hb_004899_310 Hb_009557_050 Hb_009557_050 Hb_001221_520--Hb_009557_050 Hb_004241_200 Hb_004241_200 Hb_001221_520--Hb_004241_200 Hb_008406_030 Hb_008406_030 Hb_001221_520--Hb_008406_030 Hb_001221_520--Hb_001507_030 Hb_005227_050 Hb_005227_050 Hb_001221_520--Hb_005227_050 Hb_004158_100 Hb_004158_100 Hb_118094_010--Hb_004158_100 Hb_118094_010--Hb_001507_030 Hb_118094_010--Hb_001221_520 Hb_000318_080 Hb_000318_080 Hb_118094_010--Hb_000318_080 Hb_015586_010 Hb_015586_010 Hb_118094_010--Hb_015586_010 Hb_001511_190 Hb_001511_190 Hb_001507_030--Hb_001511_190 Hb_005663_070 Hb_005663_070 Hb_001507_030--Hb_005663_070 Hb_001944_020 Hb_001944_020 Hb_001507_030--Hb_001944_020 Hb_001507_030--Hb_003020_180 Hb_002450_030 Hb_002450_030 Hb_001507_030--Hb_002450_030 Hb_002759_260 Hb_002759_260 Hb_001507_030--Hb_002759_260 Hb_002820_120 Hb_002820_120 Hb_001999_240--Hb_002820_120 Hb_001999_240--Hb_001221_520 Hb_003910_020 Hb_003910_020 Hb_001999_240--Hb_003910_020 Hb_001999_240--Hb_009557_050 Hb_186647_010 Hb_186647_010 Hb_001999_240--Hb_186647_010 Hb_002639_100 Hb_002639_100 Hb_003020_180--Hb_002639_100 Hb_006935_010 Hb_006935_010 Hb_003020_180--Hb_006935_010 Hb_005779_030 Hb_005779_030 Hb_003020_180--Hb_005779_030 Hb_000627_090 Hb_000627_090 Hb_003020_180--Hb_000627_090 Hb_003687_030 Hb_003687_030 Hb_003020_180--Hb_003687_030 Hb_003442_100 Hb_003442_100 Hb_004899_310--Hb_003442_100 Hb_004899_310--Hb_005779_030 Hb_000162_220 Hb_000162_220 Hb_004899_310--Hb_000162_220 Hb_111051_010 Hb_111051_010 Hb_004899_310--Hb_111051_010 Hb_000407_070 Hb_000407_070 Hb_004899_310--Hb_000407_070 Hb_004453_070 Hb_004453_070 Hb_004899_310--Hb_004453_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.475852 15.5107 3.48108 24.6567 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.05297 7.2898 1.94981 3.70939 1.22124

CAGE analysis