Hb_153774_010

Information

Type -
Description -
Location Contig153774: 2989-3210
Sequence    

Annotation

kegg
ID rcu:RCOM_1298460
description hypothetical protein
nr
ID XP_002519371.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S052
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1298460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153774_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001998_100 0.098355445 - - -
3 Hb_009010_040 0.171248375 - - Peptide transporter, putative [Ricinus communis]
4 Hb_009111_060 0.1888683462 - - PREDICTED: sodium transporter HKT1-like [Jatropha curcas]
5 Hb_002759_270 0.193082955 - - Nectarin-1 precursor, putative [Ricinus communis]
6 Hb_005356_050 0.1945461178 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
7 Hb_002925_040 0.2109556939 desease resistance Gene Name: TIR hypothetical protein JCGZ_01545 [Jatropha curcas]
8 Hb_001369_500 0.2148613795 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
9 Hb_000203_120 0.2163508715 - - conserved hypothetical protein [Ricinus communis]
10 Hb_008727_090 0.2166177835 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
11 Hb_003360_050 0.2181256761 - - calmodulin binding protein, putative [Ricinus communis]
12 Hb_181191_010 0.2183432417 - - kinase, putative [Ricinus communis]
13 Hb_003014_010 0.2200226959 transcription factor TF Family: HB hypothetical protein POPTR_0017s11800g [Populus trichocarpa]
14 Hb_000203_110 0.2222451747 - - -
15 Hb_002193_070 0.2260131117 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000917_220 0.2292246437 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
17 Hb_002320_050 0.2297601177 - - clathrin assembly family protein [Populus trichocarpa]
18 Hb_003747_080 0.2300954498 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
19 Hb_018671_010 0.2306648983 - - -
20 Hb_002186_120 0.2317998608 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]

Gene co-expression network

sample Hb_153774_010 Hb_153774_010 Hb_001998_100 Hb_001998_100 Hb_153774_010--Hb_001998_100 Hb_009010_040 Hb_009010_040 Hb_153774_010--Hb_009010_040 Hb_009111_060 Hb_009111_060 Hb_153774_010--Hb_009111_060 Hb_002759_270 Hb_002759_270 Hb_153774_010--Hb_002759_270 Hb_005356_050 Hb_005356_050 Hb_153774_010--Hb_005356_050 Hb_002925_040 Hb_002925_040 Hb_153774_010--Hb_002925_040 Hb_003014_010 Hb_003014_010 Hb_001998_100--Hb_003014_010 Hb_001998_100--Hb_009111_060 Hb_001998_100--Hb_009010_040 Hb_031822_020 Hb_031822_020 Hb_001998_100--Hb_031822_020 Hb_120496_010 Hb_120496_010 Hb_001998_100--Hb_120496_010 Hb_009010_040--Hb_009111_060 Hb_009010_040--Hb_005356_050 Hb_002193_070 Hb_002193_070 Hb_009010_040--Hb_002193_070 Hb_009010_040--Hb_031822_020 Hb_009111_060--Hb_031822_020 Hb_000381_140 Hb_000381_140 Hb_009111_060--Hb_000381_140 Hb_002874_100 Hb_002874_100 Hb_009111_060--Hb_002874_100 Hb_000269_050 Hb_000269_050 Hb_009111_060--Hb_000269_050 Hb_000366_070 Hb_000366_070 Hb_009111_060--Hb_000366_070 Hb_000270_590 Hb_000270_590 Hb_009111_060--Hb_000270_590 Hb_104362_020 Hb_104362_020 Hb_002759_270--Hb_104362_020 Hb_179367_010 Hb_179367_010 Hb_002759_270--Hb_179367_010 Hb_151027_010 Hb_151027_010 Hb_002759_270--Hb_151027_010 Hb_002014_120 Hb_002014_120 Hb_002759_270--Hb_002014_120 Hb_000174_130 Hb_000174_130 Hb_002759_270--Hb_000174_130 Hb_004652_040 Hb_004652_040 Hb_002759_270--Hb_004652_040 Hb_005183_020 Hb_005183_020 Hb_005356_050--Hb_005183_020 Hb_002320_050 Hb_002320_050 Hb_005356_050--Hb_002320_050 Hb_001396_080 Hb_001396_080 Hb_005356_050--Hb_001396_080 Hb_011930_090 Hb_011930_090 Hb_005356_050--Hb_011930_090 Hb_006061_020 Hb_006061_020 Hb_005356_050--Hb_006061_020 Hb_000710_130 Hb_000710_130 Hb_005356_050--Hb_000710_130 Hb_069384_010 Hb_069384_010 Hb_002925_040--Hb_069384_010 Hb_000186_090 Hb_000186_090 Hb_002925_040--Hb_000186_090 Hb_011218_010 Hb_011218_010 Hb_002925_040--Hb_011218_010 Hb_004102_180 Hb_004102_180 Hb_002925_040--Hb_004102_180 Hb_007290_010 Hb_007290_010 Hb_002925_040--Hb_007290_010 Hb_007292_020 Hb_007292_020 Hb_002925_040--Hb_007292_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.572214 0.507162 7.80484 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.883155 0 0

CAGE analysis