Hb_004652_040

Information

Type -
Description -
Location Contig4652: 17117-19082
Sequence    

Annotation

kegg
ID rcu:RCOM_0191610
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.26)
nr
ID XP_002532358.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID P0DH87
description Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1
trembl
ID B9T289
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_0191610 PE=3 SV=1
Gene Ontology
ID GO:0016301
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004652_040 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_002014_120 0.0104148494 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
3 Hb_103000_010 0.0134173743 - - hypothetical protein POPTR_0007s02210g [Populus trichocarpa]
4 Hb_003337_010 0.0221666534 - - conserved hypothetical protein [Ricinus communis]
5 Hb_179367_010 0.0243702207 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
6 Hb_009838_030 0.0387308051 - - Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
7 Hb_000174_130 0.0408794579 - - flowering locus T-like protein [Fagus crenata]
8 Hb_104362_020 0.0448160281 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_001948_100 0.0456153901 - - conserved hypothetical protein [Ricinus communis]
10 Hb_166700_010 0.0553269273 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
11 Hb_000352_020 0.0575313945 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
12 Hb_151027_010 0.0624940367 - - (+)-delta-cadinene synthase isozyme A, putative [Ricinus communis]
13 Hb_010261_050 0.0700692236 - - DNA binding protein, putative [Ricinus communis]
14 Hb_000152_090 0.0814242767 - - unnamed protein product [Coffea canephora]
15 Hb_003442_020 0.0865221685 - - ccd1, putative [Ricinus communis]
16 Hb_003073_060 0.0936906221 - - -
17 Hb_007125_020 0.0952909578 - - hypothetical protein POPTR_0003s18010g [Populus trichocarpa]
18 Hb_001006_130 0.0985022686 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]
19 Hb_005428_010 0.101862173 - - cytochrome P450, putative [Ricinus communis]
20 Hb_174829_030 0.1073804001 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004652_040 Hb_004652_040 Hb_002014_120 Hb_002014_120 Hb_004652_040--Hb_002014_120 Hb_103000_010 Hb_103000_010 Hb_004652_040--Hb_103000_010 Hb_003337_010 Hb_003337_010 Hb_004652_040--Hb_003337_010 Hb_179367_010 Hb_179367_010 Hb_004652_040--Hb_179367_010 Hb_009838_030 Hb_009838_030 Hb_004652_040--Hb_009838_030 Hb_000174_130 Hb_000174_130 Hb_004652_040--Hb_000174_130 Hb_002014_120--Hb_103000_010 Hb_002014_120--Hb_179367_010 Hb_002014_120--Hb_003337_010 Hb_002014_120--Hb_009838_030 Hb_001948_100 Hb_001948_100 Hb_002014_120--Hb_001948_100 Hb_103000_010--Hb_003337_010 Hb_103000_010--Hb_179367_010 Hb_103000_010--Hb_000174_130 Hb_166700_010 Hb_166700_010 Hb_103000_010--Hb_166700_010 Hb_003337_010--Hb_001948_100 Hb_003337_010--Hb_179367_010 Hb_003337_010--Hb_009838_030 Hb_104362_020 Hb_104362_020 Hb_179367_010--Hb_104362_020 Hb_179367_010--Hb_000174_130 Hb_151027_010 Hb_151027_010 Hb_179367_010--Hb_151027_010 Hb_000352_020 Hb_000352_020 Hb_009838_030--Hb_000352_020 Hb_009838_030--Hb_001948_100 Hb_009838_030--Hb_179367_010 Hb_000174_130--Hb_166700_010 Hb_000174_130--Hb_151027_010 Hb_000174_130--Hb_104362_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0809691 0.0546014 0.329044 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis