Hb_104362_020

Information

Type -
Description -
Location Contig104362: 347-763
Sequence    

Annotation

kegg
ID pop:POPTR_0017s06310g
description hypothetical protein
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q9FID5
description Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1
trembl
ID A0A067LFF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23766 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_104362_020 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_179367_010 0.0208921557 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
3 Hb_151027_010 0.0250553937 - - (+)-delta-cadinene synthase isozyme A, putative [Ricinus communis]
4 Hb_000174_130 0.0378036082 - - flowering locus T-like protein [Fagus crenata]
5 Hb_002014_120 0.0447018638 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
6 Hb_004652_040 0.0448160281 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
7 Hb_103000_010 0.0500694135 - - hypothetical protein POPTR_0007s02210g [Populus trichocarpa]
8 Hb_166700_010 0.0520806232 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
9 Hb_009838_030 0.0617544964 - - Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
10 Hb_000352_020 0.0635720895 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
11 Hb_174829_030 0.0648716433 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003337_010 0.0659398904 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001006_080 0.0736964822 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
14 Hb_001006_130 0.0820701808 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]
15 Hb_001948_100 0.0852196176 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000696_120 0.0891619484 - - PREDICTED: protein FD [Populus euphratica]
17 Hb_010080_040 0.0915535919 - - conserved hypothetical protein [Ricinus communis]
18 Hb_010261_050 0.0963597357 - - DNA binding protein, putative [Ricinus communis]
19 Hb_000917_220 0.0993844217 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
20 Hb_008196_010 0.104428002 - - unnamed protein product [Coffea canephora]

Gene co-expression network

sample Hb_104362_020 Hb_104362_020 Hb_179367_010 Hb_179367_010 Hb_104362_020--Hb_179367_010 Hb_151027_010 Hb_151027_010 Hb_104362_020--Hb_151027_010 Hb_000174_130 Hb_000174_130 Hb_104362_020--Hb_000174_130 Hb_002014_120 Hb_002014_120 Hb_104362_020--Hb_002014_120 Hb_004652_040 Hb_004652_040 Hb_104362_020--Hb_004652_040 Hb_103000_010 Hb_103000_010 Hb_104362_020--Hb_103000_010 Hb_179367_010--Hb_002014_120 Hb_179367_010--Hb_004652_040 Hb_179367_010--Hb_103000_010 Hb_179367_010--Hb_000174_130 Hb_179367_010--Hb_151027_010 Hb_151027_010--Hb_000174_130 Hb_166700_010 Hb_166700_010 Hb_151027_010--Hb_166700_010 Hb_174829_030 Hb_174829_030 Hb_151027_010--Hb_174829_030 Hb_151027_010--Hb_004652_040 Hb_000174_130--Hb_166700_010 Hb_000174_130--Hb_103000_010 Hb_000174_130--Hb_004652_040 Hb_002014_120--Hb_004652_040 Hb_002014_120--Hb_103000_010 Hb_003337_010 Hb_003337_010 Hb_002014_120--Hb_003337_010 Hb_009838_030 Hb_009838_030 Hb_002014_120--Hb_009838_030 Hb_001948_100 Hb_001948_100 Hb_002014_120--Hb_001948_100 Hb_004652_040--Hb_103000_010 Hb_004652_040--Hb_003337_010 Hb_004652_040--Hb_009838_030 Hb_103000_010--Hb_003337_010 Hb_103000_010--Hb_166700_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.655017 0.641038 3.42538 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis