Hb_007290_010

Information

Type -
Description -
Location Contig7290: 30123-32631
Sequence    

Annotation

kegg
ID rcu:RCOM_0331070
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002533544.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9ZUX1
description Cytochrome P450 94C1 OS=Arabidopsis thaliana GN=CYP94C1 PE=2 SV=1
trembl
ID B9T5M5
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0331070 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 94c1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55888: 30084-31547
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007290_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_003561_020 0.0475160972 - - gulonolactone oxidase, putative [Ricinus communis]
3 Hb_004137_090 0.0550447266 - - PREDICTED: tumor necrosis factor ligand superfamily member 6 [Populus euphratica]
4 Hb_004102_180 0.0732668125 - - zinc finger family protein [Populus trichocarpa]
5 Hb_069384_010 0.078467533 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]
6 Hb_010608_040 0.0795102916 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]
7 Hb_011218_010 0.0906097978 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
8 Hb_178968_010 0.0916389486 - - hypothetical protein JCGZ_15830 [Jatropha curcas]
9 Hb_007292_020 0.0962303926 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
10 Hb_003540_010 0.0966467437 - - -
11 Hb_000053_150 0.0986456511 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
12 Hb_002326_090 0.0990182805 - - amino acid transporter, putative [Ricinus communis]
13 Hb_002232_340 0.0993361574 - - Sodium transporter hkt1-like protein, putative [Theobroma cacao]
14 Hb_018671_010 0.0995321582 - - -
15 Hb_002186_120 0.1015390627 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
16 Hb_000230_220 0.1026322651 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003216_010 0.1028019737 - - glycosyl hydrolase family protein [Populus trichocarpa]
18 Hb_006618_060 0.1045390127 - - PREDICTED: 21 kDa protein [Jatropha curcas]
19 Hb_002925_040 0.1059198843 desease resistance Gene Name: TIR hypothetical protein JCGZ_01545 [Jatropha curcas]
20 Hb_000224_050 0.1059349137 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007290_010 Hb_007290_010 Hb_003561_020 Hb_003561_020 Hb_007290_010--Hb_003561_020 Hb_004137_090 Hb_004137_090 Hb_007290_010--Hb_004137_090 Hb_004102_180 Hb_004102_180 Hb_007290_010--Hb_004102_180 Hb_069384_010 Hb_069384_010 Hb_007290_010--Hb_069384_010 Hb_010608_040 Hb_010608_040 Hb_007290_010--Hb_010608_040 Hb_011218_010 Hb_011218_010 Hb_007290_010--Hb_011218_010 Hb_003561_020--Hb_004137_090 Hb_010080_040 Hb_010080_040 Hb_003561_020--Hb_010080_040 Hb_003540_010 Hb_003540_010 Hb_003561_020--Hb_003540_010 Hb_003216_010 Hb_003216_010 Hb_003561_020--Hb_003216_010 Hb_000917_220 Hb_000917_220 Hb_003561_020--Hb_000917_220 Hb_178968_010 Hb_178968_010 Hb_004137_090--Hb_178968_010 Hb_004137_090--Hb_003540_010 Hb_004137_090--Hb_003216_010 Hb_000053_150 Hb_000053_150 Hb_004137_090--Hb_000053_150 Hb_004102_180--Hb_069384_010 Hb_000175_600 Hb_000175_600 Hb_004102_180--Hb_000175_600 Hb_004102_180--Hb_011218_010 Hb_007292_060 Hb_007292_060 Hb_004102_180--Hb_007292_060 Hb_002326_090 Hb_002326_090 Hb_004102_180--Hb_002326_090 Hb_069384_010--Hb_011218_010 Hb_000186_090 Hb_000186_090 Hb_069384_010--Hb_000186_090 Hb_007292_020 Hb_007292_020 Hb_069384_010--Hb_007292_020 Hb_000152_630 Hb_000152_630 Hb_069384_010--Hb_000152_630 Hb_010608_040--Hb_002326_090 Hb_000796_110 Hb_000796_110 Hb_010608_040--Hb_000796_110 Hb_097213_010 Hb_097213_010 Hb_010608_040--Hb_097213_010 Hb_010608_040--Hb_007292_060 Hb_010608_040--Hb_000175_600 Hb_011218_010--Hb_007292_060 Hb_011218_010--Hb_000175_600 Hb_000964_120 Hb_000964_120 Hb_011218_010--Hb_000964_120 Hb_011218_010--Hb_002326_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.704328 1.77532 12.589 0 0.015127
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0106772 0.222898

CAGE analysis