Hb_008221_170

Information

Type transcription factor
Description TF Family: BES1
Location Contig8221: 67805-71854
Sequence    

Annotation

kegg
ID vvi:100241756
description BES1/BZR1 homolog protein 4
nr
ID XP_011002762.1
description PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Populus euphratica]
swissprot
ID Q9ZV88
description BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1
trembl
ID A0A067DLE1
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020567mg PE=4 SV=1
Gene Ontology
ID GO:0006355
description bes1 bzr1 homolog protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59617: 67854-72113 , PASA_asmbl_59618: 68407-68844
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008221_170 0.0 transcription factor TF Family: BES1 PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Populus euphratica]
2 Hb_002046_020 0.1252993899 - - PREDICTED: putative clathrin assembly protein At2g25430 [Jatropha curcas]
3 Hb_002631_200 0.1257442923 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
4 Hb_001105_160 0.127991527 - - PREDICTED: protein phosphatase 2C 32 [Jatropha curcas]
5 Hb_000487_380 0.1290384233 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
6 Hb_002662_050 0.1309918362 - - cysteine protease CP1 [Manihot esculenta]
7 Hb_007576_200 0.1326815851 - - amino acid transporter, putative [Ricinus communis]
8 Hb_002153_030 0.1327705746 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
9 Hb_008246_020 0.1341448184 - - amidophosphoribosyltransferase, putative [Ricinus communis]
10 Hb_039342_010 0.1358899023 - - pyruvate decarboxylase [Hevea brasiliensis]
11 Hb_000571_160 0.1415082425 - - PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]
12 Hb_002693_060 0.1418204098 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
13 Hb_000656_150 0.1430400882 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
14 Hb_000856_180 0.1438628907 - - calcium-dependent protein kinase [Hevea brasiliensis]
15 Hb_001160_070 0.1444222055 - - PREDICTED: uncharacterized protein LOC105632163 [Jatropha curcas]
16 Hb_001414_040 0.1455543727 - - PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha curcas]
17 Hb_000037_220 0.146071855 - - PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Jatropha curcas]
18 Hb_001481_160 0.1484310513 - - PREDICTED: RING-H2 finger protein ATL22-like [Populus euphratica]
19 Hb_011287_050 0.1484744509 - - PREDICTED: uncharacterized protein LOC105644786 [Jatropha curcas]
20 Hb_083799_010 0.1485351528 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_008221_170 Hb_008221_170 Hb_002046_020 Hb_002046_020 Hb_008221_170--Hb_002046_020 Hb_002631_200 Hb_002631_200 Hb_008221_170--Hb_002631_200 Hb_001105_160 Hb_001105_160 Hb_008221_170--Hb_001105_160 Hb_000487_380 Hb_000487_380 Hb_008221_170--Hb_000487_380 Hb_002662_050 Hb_002662_050 Hb_008221_170--Hb_002662_050 Hb_007576_200 Hb_007576_200 Hb_008221_170--Hb_007576_200 Hb_002046_020--Hb_000487_380 Hb_000236_410 Hb_000236_410 Hb_002046_020--Hb_000236_410 Hb_000941_130 Hb_000941_130 Hb_002046_020--Hb_000941_130 Hb_000025_280 Hb_000025_280 Hb_002046_020--Hb_000025_280 Hb_003071_020 Hb_003071_020 Hb_002046_020--Hb_003071_020 Hb_003078_020 Hb_003078_020 Hb_002046_020--Hb_003078_020 Hb_000083_270 Hb_000083_270 Hb_002631_200--Hb_000083_270 Hb_002153_030 Hb_002153_030 Hb_002631_200--Hb_002153_030 Hb_000009_120 Hb_000009_120 Hb_002631_200--Hb_000009_120 Hb_000571_160 Hb_000571_160 Hb_002631_200--Hb_000571_160 Hb_011861_080 Hb_011861_080 Hb_002631_200--Hb_011861_080 Hb_185830_070 Hb_185830_070 Hb_002631_200--Hb_185830_070 Hb_011287_050 Hb_011287_050 Hb_001105_160--Hb_011287_050 Hb_041327_010 Hb_041327_010 Hb_001105_160--Hb_041327_010 Hb_005568_040 Hb_005568_040 Hb_001105_160--Hb_005568_040 Hb_012092_060 Hb_012092_060 Hb_001105_160--Hb_012092_060 Hb_071130_010 Hb_071130_010 Hb_001105_160--Hb_071130_010 Hb_010809_010 Hb_010809_010 Hb_001105_160--Hb_010809_010 Hb_004586_290 Hb_004586_290 Hb_000487_380--Hb_004586_290 Hb_011242_060 Hb_011242_060 Hb_000487_380--Hb_011242_060 Hb_000487_380--Hb_003078_020 Hb_000487_380--Hb_005568_040 Hb_000487_380--Hb_011287_050 Hb_012239_030 Hb_012239_030 Hb_002662_050--Hb_012239_030 Hb_000674_010 Hb_000674_010 Hb_002662_050--Hb_000674_010 Hb_001205_110 Hb_001205_110 Hb_002662_050--Hb_001205_110 Hb_023765_010 Hb_023765_010 Hb_002662_050--Hb_023765_010 Hb_000099_030 Hb_000099_030 Hb_002662_050--Hb_000099_030 Hb_003747_210 Hb_003747_210 Hb_007576_200--Hb_003747_210 Hb_000371_060 Hb_000371_060 Hb_007576_200--Hb_000371_060 Hb_000676_040 Hb_000676_040 Hb_007576_200--Hb_000676_040 Hb_000656_150 Hb_000656_150 Hb_007576_200--Hb_000656_150 Hb_000302_200 Hb_000302_200 Hb_007576_200--Hb_000302_200 Hb_002122_080 Hb_002122_080 Hb_007576_200--Hb_002122_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.8103 23.9592 4.19791 18.9647 6.58123 7.66718
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.39247 3.5997 10.0623 20.752 8.03961

CAGE analysis