Hb_000571_160

Information

Type -
Description -
Location Contig571: 179731-187178
Sequence    

Annotation

kegg
ID rcu:RCOM_0847580
description ubiquitin-activating enzyme E1, putative
nr
ID XP_012089793.1
description PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]
swissprot
ID P93028
description Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana GN=UBA1 PE=1 SV=1
trembl
ID A0A067JS67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00432 PE=3 SV=1
Gene Ontology
ID GO:0005524
description ubiquitin-activating enzyme e1 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49363: 179826-186888
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000571_160 0.0 - - PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]
2 Hb_000049_150 0.0660760883 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
3 Hb_004109_380 0.0850752873 - - PREDICTED: callose synthase 9 isoform X4 [Pyrus x bretschneideri]
4 Hb_010809_010 0.0866463008 - - Na+/H+ antiporter [Populus euphratica]
5 Hb_006907_140 0.0910059284 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007576_210 0.0912978263 - - PREDICTED: protein furry homolog [Jatropha curcas]
7 Hb_011828_030 0.0913611955 - - ubiquitin protein ligase E3a, putative [Ricinus communis]
8 Hb_011861_080 0.0960626849 - - hypothetical protein JCGZ_06088 [Jatropha curcas]
9 Hb_001699_280 0.0972650119 - - PREDICTED: transformation/transcription domain-associated protein [Jatropha curcas]
10 Hb_000105_040 0.0972717428 - - PREDICTED: serine/threonine-protein kinase TOR isoform X2 [Jatropha curcas]
11 Hb_002631_200 0.0977727678 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
12 Hb_000170_100 0.0982264507 transcription factor TF Family: C3H hypothetical protein JCGZ_12159 [Jatropha curcas]
13 Hb_002027_190 0.0987025444 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
14 Hb_007632_010 0.1001780942 - - PREDICTED: E3 ubiquitin-protein ligase UPL1 isoform X1 [Jatropha curcas]
15 Hb_000679_210 0.1013250442 - - grr1, plant, putative [Ricinus communis]
16 Hb_002005_030 0.101606492 - - PREDICTED: uncharacterized protein LOC105649755 [Jatropha curcas]
17 Hb_001414_040 0.1036100661 - - PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha curcas]
18 Hb_001105_160 0.1055218089 - - PREDICTED: protein phosphatase 2C 32 [Jatropha curcas]
19 Hb_006531_020 0.106548016 - - PREDICTED: autophagy-related protein 13 [Jatropha curcas]
20 Hb_000512_030 0.1067755411 - - wall-associated kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000571_160 Hb_000571_160 Hb_000049_150 Hb_000049_150 Hb_000571_160--Hb_000049_150 Hb_004109_380 Hb_004109_380 Hb_000571_160--Hb_004109_380 Hb_010809_010 Hb_010809_010 Hb_000571_160--Hb_010809_010 Hb_006907_140 Hb_006907_140 Hb_000571_160--Hb_006907_140 Hb_007576_210 Hb_007576_210 Hb_000571_160--Hb_007576_210 Hb_011828_030 Hb_011828_030 Hb_000571_160--Hb_011828_030 Hb_000049_150--Hb_010809_010 Hb_000049_150--Hb_004109_380 Hb_000170_100 Hb_000170_100 Hb_000049_150--Hb_000170_100 Hb_000105_040 Hb_000105_040 Hb_000049_150--Hb_000105_040 Hb_006531_020 Hb_006531_020 Hb_000049_150--Hb_006531_020 Hb_001031_090 Hb_001031_090 Hb_004109_380--Hb_001031_090 Hb_004223_160 Hb_004223_160 Hb_004109_380--Hb_004223_160 Hb_004109_380--Hb_000105_040 Hb_002005_030 Hb_002005_030 Hb_004109_380--Hb_002005_030 Hb_001699_280 Hb_001699_280 Hb_004109_380--Hb_001699_280 Hb_010809_010--Hb_000105_040 Hb_001105_160 Hb_001105_160 Hb_010809_010--Hb_001105_160 Hb_005568_040 Hb_005568_040 Hb_010809_010--Hb_005568_040 Hb_012055_040 Hb_012055_040 Hb_010809_010--Hb_012055_040 Hb_000479_240 Hb_000479_240 Hb_010809_010--Hb_000479_240 Hb_006907_140--Hb_002005_030 Hb_001414_040 Hb_001414_040 Hb_006907_140--Hb_001414_040 Hb_001341_160 Hb_001341_160 Hb_006907_140--Hb_001341_160 Hb_000172_340 Hb_000172_340 Hb_006907_140--Hb_000172_340 Hb_000010_420 Hb_000010_420 Hb_006907_140--Hb_000010_420 Hb_004645_070 Hb_004645_070 Hb_006907_140--Hb_004645_070 Hb_009486_170 Hb_009486_170 Hb_007576_210--Hb_009486_170 Hb_014497_020 Hb_014497_020 Hb_007576_210--Hb_014497_020 Hb_007576_210--Hb_001699_280 Hb_007632_010 Hb_007632_010 Hb_007576_210--Hb_007632_010 Hb_002333_050 Hb_002333_050 Hb_007576_210--Hb_002333_050 Hb_003211_040 Hb_003211_040 Hb_007576_210--Hb_003211_040 Hb_011828_030--Hb_001699_280 Hb_011828_030--Hb_000105_040 Hb_011947_050 Hb_011947_050 Hb_011828_030--Hb_011947_050 Hb_000069_410 Hb_000069_410 Hb_011828_030--Hb_000069_410 Hb_000836_020 Hb_000836_020 Hb_011828_030--Hb_000836_020 Hb_003581_170 Hb_003581_170 Hb_011828_030--Hb_003581_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.7323 88.2845 18.5615 48.7821 41.7869 27.2219
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.0794 14.0737 24.5098 70.3165 40.9045

CAGE analysis