Hb_003038_250

Information

Type -
Description -
Location Contig3038: 139318-140127
Sequence    

Annotation

kegg
ID rcu:RCOM_0535010
description hypothetical protein
nr
ID XP_012092680.1
description PREDICTED: uncharacterized protein LOC105650395 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22166 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003038_250 0.0 - - PREDICTED: uncharacterized protein LOC105650395 [Jatropha curcas]
2 Hb_003529_180 0.1576605997 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
3 Hb_000009_220 0.161747197 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
4 Hb_000197_200 0.1682334376 - - Sec14 cytosolic factor, putative [Ricinus communis]
5 Hb_004725_030 0.1702910953 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X4 [Jatropha curcas]
6 Hb_000732_030 0.1705303112 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000122_010 0.1820794303 - - amino acid transporter, putative [Ricinus communis]
8 Hb_012753_210 0.1822157791 - - PREDICTED: inactive rhomboid protein 1-like [Jatropha curcas]
9 Hb_011915_040 0.1838744736 - - hypothetical protein POPTR_0009s15120g [Populus trichocarpa]
10 Hb_024836_010 0.1851551634 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
11 Hb_002600_130 0.1873321421 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
12 Hb_001214_190 0.1876212241 - - hypothetical protein JCGZ_25001 [Jatropha curcas]
13 Hb_008725_060 0.1906922615 - - Protein COBRA precursor, putative [Ricinus communis]
14 Hb_006816_100 0.1913418656 - - hypothetical protein CISIN_1g0373181mg, partial [Citrus sinensis]
15 Hb_023765_020 0.1918140716 - - PREDICTED: putative SNAP25 homologous protein SNAP30 [Populus euphratica]
16 Hb_001277_280 0.1951305243 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
17 Hb_006405_050 0.195884345 - - PREDICTED: stomatal closure-related actin-binding protein 2-like [Jatropha curcas]
18 Hb_019715_010 0.198502867 - - carbon catabolite repressor protein, putative [Ricinus communis]
19 Hb_004635_030 0.2015011155 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
20 Hb_030545_010 0.2023226274 - - PREDICTED: uncharacterized protein LOC105648741 [Jatropha curcas]

Gene co-expression network

sample Hb_003038_250 Hb_003038_250 Hb_003529_180 Hb_003529_180 Hb_003038_250--Hb_003529_180 Hb_000009_220 Hb_000009_220 Hb_003038_250--Hb_000009_220 Hb_000197_200 Hb_000197_200 Hb_003038_250--Hb_000197_200 Hb_004725_030 Hb_004725_030 Hb_003038_250--Hb_004725_030 Hb_000732_030 Hb_000732_030 Hb_003038_250--Hb_000732_030 Hb_000122_010 Hb_000122_010 Hb_003038_250--Hb_000122_010 Hb_002600_130 Hb_002600_130 Hb_003529_180--Hb_002600_130 Hb_003529_180--Hb_000732_030 Hb_011609_010 Hb_011609_010 Hb_003529_180--Hb_011609_010 Hb_003529_180--Hb_004725_030 Hb_003529_180--Hb_000009_220 Hb_000189_390 Hb_000189_390 Hb_003529_180--Hb_000189_390 Hb_014231_020 Hb_014231_020 Hb_000009_220--Hb_014231_020 Hb_000979_060 Hb_000979_060 Hb_000009_220--Hb_000979_060 Hb_011915_040 Hb_011915_040 Hb_000009_220--Hb_011915_040 Hb_000684_100 Hb_000684_100 Hb_000009_220--Hb_000684_100 Hb_156635_020 Hb_156635_020 Hb_000009_220--Hb_156635_020 Hb_000086_430 Hb_000086_430 Hb_000009_220--Hb_000086_430 Hb_002783_220 Hb_002783_220 Hb_000197_200--Hb_002783_220 Hb_001950_070 Hb_001950_070 Hb_000197_200--Hb_001950_070 Hb_000526_010 Hb_000526_010 Hb_000197_200--Hb_000526_010 Hb_002333_070 Hb_002333_070 Hb_000197_200--Hb_002333_070 Hb_000566_050 Hb_000566_050 Hb_000197_200--Hb_000566_050 Hb_094121_010 Hb_094121_010 Hb_000197_200--Hb_094121_010 Hb_000139_220 Hb_000139_220 Hb_004725_030--Hb_000139_220 Hb_005656_080 Hb_005656_080 Hb_004725_030--Hb_005656_080 Hb_000077_120 Hb_000077_120 Hb_004725_030--Hb_000077_120 Hb_001621_110 Hb_001621_110 Hb_004725_030--Hb_001621_110 Hb_013405_150 Hb_013405_150 Hb_004725_030--Hb_013405_150 Hb_026234_010 Hb_026234_010 Hb_004725_030--Hb_026234_010 Hb_000959_190 Hb_000959_190 Hb_000732_030--Hb_000959_190 Hb_003430_040 Hb_003430_040 Hb_000732_030--Hb_003430_040 Hb_074792_010 Hb_074792_010 Hb_000732_030--Hb_074792_010 Hb_001135_110 Hb_001135_110 Hb_000732_030--Hb_001135_110 Hb_000032_200 Hb_000032_200 Hb_000732_030--Hb_000032_200 Hb_009393_200 Hb_009393_200 Hb_000122_010--Hb_009393_200 Hb_000186_330 Hb_000186_330 Hb_000122_010--Hb_000186_330 Hb_007163_060 Hb_007163_060 Hb_000122_010--Hb_007163_060 Hb_008511_060 Hb_008511_060 Hb_000122_010--Hb_008511_060 Hb_010053_040 Hb_010053_040 Hb_000122_010--Hb_010053_040 Hb_000122_010--Hb_005656_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.63543 4.2467 14.1449 6.03999 2.3274 3.84287
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.12433 1.09619 3.97026 0.401268 1.04913

CAGE analysis