Hb_000526_010

Information

Type -
Description -
Location Contig526: 19882-23054
Sequence    

Annotation

kegg
ID pop:POPTR_0001s23400g
description hypothetical protein
nr
ID XP_012065508.1
description PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]
swissprot
ID Q02NA3
description Siroheme synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=cysG PE=3 SV=1
trembl
ID A0A067L4S5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16709 PE=3 SV=1
Gene Ontology
ID GO:0009507
description uroporphyrinogen-iii c-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46984: 22995-23292
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000526_010 0.0 - - PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]
2 Hb_004163_030 0.0974294778 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10 [Jatropha curcas]
3 Hb_011828_040 0.1137354572 - - PREDICTED: uncharacterized protein LOC105642173 isoform X2 [Jatropha curcas]
4 Hb_007426_220 0.1243885635 - - Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis]
5 Hb_004155_020 0.1251365983 transcription factor TF Family: MYB myb, putative [Ricinus communis]
6 Hb_002783_220 0.1319838236 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
7 Hb_002662_040 0.1377324521 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]
8 Hb_000984_220 0.1390778278 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
9 Hb_000197_200 0.1413927816 - - Sec14 cytosolic factor, putative [Ricinus communis]
10 Hb_000035_080 0.1492660974 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
11 Hb_005903_020 0.1496071252 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
12 Hb_002205_140 0.1530921976 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b [Jatropha curcas]
13 Hb_001160_110 0.1554391447 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
14 Hb_001155_050 0.1566770335 - - PREDICTED: KH domain-containing protein SPIN1-like [Jatropha curcas]
15 Hb_004221_030 0.1569373251 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
16 Hb_001232_090 0.1569899058 - - PREDICTED: regulator of telomere elongation helicase 1 homolog [Jatropha curcas]
17 Hb_007044_090 0.1596038303 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
18 Hb_011381_040 0.1609675406 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
19 Hb_011671_340 0.1639463245 - - small GTPase [Hevea brasiliensis]
20 Hb_005511_130 0.1649876444 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]

Gene co-expression network

sample Hb_000526_010 Hb_000526_010 Hb_004163_030 Hb_004163_030 Hb_000526_010--Hb_004163_030 Hb_011828_040 Hb_011828_040 Hb_000526_010--Hb_011828_040 Hb_007426_220 Hb_007426_220 Hb_000526_010--Hb_007426_220 Hb_004155_020 Hb_004155_020 Hb_000526_010--Hb_004155_020 Hb_002783_220 Hb_002783_220 Hb_000526_010--Hb_002783_220 Hb_002662_040 Hb_002662_040 Hb_000526_010--Hb_002662_040 Hb_001141_050 Hb_001141_050 Hb_004163_030--Hb_001141_050 Hb_000230_190 Hb_000230_190 Hb_004163_030--Hb_000230_190 Hb_006634_100 Hb_006634_100 Hb_004163_030--Hb_006634_100 Hb_004163_030--Hb_004155_020 Hb_004163_030--Hb_002662_040 Hb_002205_140 Hb_002205_140 Hb_011828_040--Hb_002205_140 Hb_011828_040--Hb_004155_020 Hb_001232_090 Hb_001232_090 Hb_011828_040--Hb_001232_090 Hb_003813_060 Hb_003813_060 Hb_011828_040--Hb_003813_060 Hb_000406_030 Hb_000406_030 Hb_011828_040--Hb_000406_030 Hb_005903_020 Hb_005903_020 Hb_007426_220--Hb_005903_020 Hb_011671_340 Hb_011671_340 Hb_007426_220--Hb_011671_340 Hb_000620_020 Hb_000620_020 Hb_007426_220--Hb_000620_020 Hb_001155_050 Hb_001155_050 Hb_007426_220--Hb_001155_050 Hb_001511_030 Hb_001511_030 Hb_007426_220--Hb_001511_030 Hb_002871_040 Hb_002871_040 Hb_007426_220--Hb_002871_040 Hb_004155_020--Hb_001232_090 Hb_005901_030 Hb_005901_030 Hb_004155_020--Hb_005901_030 Hb_000260_650 Hb_000260_650 Hb_004155_020--Hb_000260_650 Hb_143813_020 Hb_143813_020 Hb_004155_020--Hb_143813_020 Hb_000563_440 Hb_000563_440 Hb_004155_020--Hb_000563_440 Hb_006775_120 Hb_006775_120 Hb_002783_220--Hb_006775_120 Hb_000364_170 Hb_000364_170 Hb_002783_220--Hb_000364_170 Hb_000000_330 Hb_000000_330 Hb_002783_220--Hb_000000_330 Hb_005333_060 Hb_005333_060 Hb_002783_220--Hb_005333_060 Hb_019654_050 Hb_019654_050 Hb_002783_220--Hb_019654_050 Hb_000987_040 Hb_000987_040 Hb_002783_220--Hb_000987_040 Hb_002662_040--Hb_006634_100 Hb_000244_150 Hb_000244_150 Hb_002662_040--Hb_000244_150 Hb_000935_080 Hb_000935_080 Hb_002662_040--Hb_000935_080 Hb_002662_040--Hb_011828_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.610842 1.1821 7.78011 4.15291 0.566239 1.09591
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.615885 0.692058 1.98831 1.27694 1.56929

CAGE analysis